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  5. AT4G05220

AT4G05220


Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family


Gene families : OG0000075 (Archaeplastida) Phylogenetic Tree(s): OG0000075_tree ,
OG_05_0000104 (LandPlants) Phylogenetic Tree(s): OG_05_0000104_tree ,
OG_06_0000194 (SeedPlants) Phylogenetic Tree(s): OG_06_0000194_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G05220
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00185810 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00140p00027980 evm_27.TU.AmTr_v1... Uncharacterized protein At1g08160 OS=Arabidopsis thaliana 0.06 Archaeplastida
AT2G27260 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 Archaeplastida
AT4G01410 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01012622001 No alias No description available 0.19 Archaeplastida
GSVIVT01031450001 No alias Uncharacterized protein At1g08160 OS=Arabidopsis thaliana 0.14 Archaeplastida
GSVIVT01037448001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_00037 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_00667 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_04457 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_13977 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_14222 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_26590 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_41030 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g33550.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g44670.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g33990.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g58860.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os09g09460.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os10g39970.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10155182g0010 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.08 Archaeplastida
MA_10429254g0020 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_112233g0010 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.08 Archaeplastida
MA_180376g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_182952g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_27406g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.09 Archaeplastida
MA_564044g0010 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_606673g0010 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Pp3c20_23440V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Archaeplastida
Pp3c23_12930V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
Solyc02g080100.1.1 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.2 Archaeplastida
Solyc02g081450.2.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g019920.1.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc11g066490.1.1 No alias Uncharacterized protein At1g08160 OS=Arabidopsis... 0.09 Archaeplastida
Zm00001e002284_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e006462_P001 No alias no hits & (original description: none) 0.16 Archaeplastida
Zm00001e010501_P001 No alias no hits & (original description: none) 0.18 Archaeplastida
Zm00001e015371_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e025983_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e039408_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004630 phospholipase D activity IEP Neighborhood
MF GO:0004816 asparagine-tRNA ligase activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0005986 sucrose biosynthetic process IEP Neighborhood
BP GO:0006421 asparaginyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0009820 alkaloid metabolic process IEP Neighborhood
BP GO:0009821 alkaloid biosynthetic process IEP Neighborhood
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016688 L-ascorbate peroxidase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0032890 regulation of organic acid transport IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0045298 tubulin complex IEP Neighborhood
BP GO:0046466 membrane lipid catabolic process IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0051015 actin filament binding IEP Neighborhood
BP GO:0051017 actin filament bundle assembly IEP Neighborhood
BP GO:0051952 regulation of amine transport IEP Neighborhood
BP GO:0051955 regulation of amino acid transport IEP Neighborhood
BP GO:0061572 actin filament bundle organization IEP Neighborhood
BP GO:0071258 cellular response to gravity IEP Neighborhood
BP GO:0080143 regulation of amino acid export IEP Neighborhood
BP GO:0080165 callose deposition in phloem sieve plate IEP Neighborhood
BP GO:1903789 regulation of amino acid transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004864 LEA_2 99 203
No external refs found!