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  5. AT4G05330

AT4G05330 (AGD13)


Aliases : AGD13

Description : ARF-GAP domain 13


Gene families : OG0000234 (Archaeplastida) Phylogenetic Tree(s): OG0000234_tree ,
OG_05_0001457 (LandPlants) Phylogenetic Tree(s): OG_05_0001457_tree ,
OG_06_0001064 (SeedPlants) Phylogenetic Tree(s): OG_06_0001064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G05330
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00013660 evm_27.TU.AmTr_v1... Probable ADP-ribosylation factor GTPase-activating... 0.04 Archaeplastida
AT1G48590 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.06 Archaeplastida
LOC_Os01g72230.1 No alias class III ARF-GAP ARF-GTPase-activating protein 0.01 Archaeplastida
LOC_Os02g10480.6 No alias class III ARF-GAP ARF-GTPase-activating protein 0.02 Archaeplastida
LOC_Os07g01770.1 No alias CAR abscisic acid receptor recruitment factor 0.14 Archaeplastida
LOC_Os07g31720.1 No alias Protein C2-DOMAIN ABA-RELATED 9 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10147605g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10430973g0010 No alias class III ARF-GAP ARF-GTPase-activating protein 0.01 Archaeplastida
MA_15689g0010 No alias Protein C2-DOMAIN ABA-RELATED 10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_387817g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c21_2140V3.1 No alias Calcium-dependent ARF-type GTPase activating protein family 0.02 Archaeplastida
Solyc03g118710.3.1 No alias CAR abscisic acid receptor recruitment factor 0.01 Archaeplastida
Solyc06g053390.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g068940.4.1 No alias CAR abscisic acid receptor recruitment factor 0.09 Archaeplastida
Solyc12g040800.2.1 No alias CAR abscisic acid receptor recruitment factor 0.04 Archaeplastida
Zm00001e011574_P001 No alias Protein C2-DOMAIN ABA-RELATED 8 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e015687_P004 No alias class III ARF-GAP ARF-GTPase-activating protein 0.04 Archaeplastida
Zm00001e023402_P004 No alias class III ARF-GAP ARF-GTPase-activating protein 0.04 Archaeplastida
Zm00001e028315_P003 No alias class III ARF-GAP ARF-GTPase-activating protein 0.11 Archaeplastida
Zm00001e032678_P001 No alias CAR abscisic acid receptor recruitment factor 0.04 Archaeplastida
Zm00001e032704_P003 No alias CAR abscisic acid receptor recruitment factor 0.04 Archaeplastida
Zm00001e035048_P001 No alias Protein C2-DOMAIN ABA-RELATED 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009555 pollen development IMP Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0001558 regulation of cell growth IEP Neighborhood
BP GO:0002238 response to molecule of fungal origin IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004623 phospholipase A2 activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Neighborhood
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005451 monovalent cation:proton antiporter activity IEP Neighborhood
MF GO:0005548 phospholipid transporter activity IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006814 sodium ion transport IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0006935 chemotaxis IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008526 phosphatidylinositol transporter activity IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009827 plant-type cell wall modification IEP Neighborhood
BP GO:0009846 pollen germination IEP Neighborhood
BP GO:0009860 pollen tube growth IEP Neighborhood
BP GO:0009932 cell tip growth IEP Neighborhood
CC GO:0010005 cortical microtubule, transverse to long axis IEP Neighborhood
BP GO:0010183 pollen tube guidance IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0010942 positive regulation of cell death IEP Neighborhood
BP GO:0010959 regulation of metal ion transport IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015491 cation:cation antiporter activity IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
CC GO:0016324 apical plasma membrane IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0022604 regulation of cell morphogenesis IEP Neighborhood
BP GO:0022898 regulation of transmembrane transporter activity IEP Neighborhood
BP GO:0030029 actin filament-based process IEP Neighborhood
BP GO:0030048 actin filament-based movement IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030307 positive regulation of cell growth IEP Neighborhood
CC GO:0030427 site of polarized growth IEP Neighborhood
BP GO:0032409 regulation of transporter activity IEP Neighborhood
BP GO:0032412 regulation of ion transmembrane transporter activity IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
CC GO:0035838 growing cell tip IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0040011 locomotion IEP Neighborhood
MF GO:0042284 sphingolipid delta-4 desaturase activity IEP Neighborhood
BP GO:0042330 taxis IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
CC GO:0042995 cell projection IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043068 positive regulation of programmed cell death IEP Neighborhood
BP GO:0043266 regulation of potassium ion transport IEP Neighborhood
CC GO:0044463 cell projection part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0045595 regulation of cell differentiation IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0048588 developmental cell growth IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050918 positive chemotaxis IEP Neighborhood
MF GO:0051015 actin filament binding IEP Neighborhood
BP GO:0051017 actin filament bundle assembly IEP Neighborhood
CC GO:0051286 cell tip IEP Neighborhood
BP GO:0051510 regulation of unidimensional cell growth IEP Neighborhood
CC GO:0055028 cortical microtubule IEP Neighborhood
BP GO:0060284 regulation of cell development IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
BP GO:0061572 actin filament bundle organization IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0080092 regulation of pollen tube growth IEP Neighborhood
BP GO:0080147 root hair cell development IEP Neighborhood
CC GO:0090404 pollen tube tip IEP Neighborhood
CC GO:0090406 pollen tube IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
MF GO:0099516 ion antiporter activity IEP Neighborhood
CC GO:0120025 plasma membrane bounded cell projection IEP Neighborhood
CC GO:0120038 plasma membrane bounded cell projection part IEP Neighborhood
BP GO:1901016 regulation of potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:1901379 regulation of potassium ion transmembrane transport IEP Neighborhood
BP GO:1901979 regulation of inward rectifier potassium channel activity IEP Neighborhood
BP GO:2001257 regulation of cation channel activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000008 C2_dom 180 270
IPR001164 ArfGAP_dom 16 131
No external refs found!