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  5. Mp5g20430.1

Mp5g20430.1


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g20430.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00063420 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.03 Archaeplastida
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 Archaeplastida
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.03 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.01 Archaeplastida
AT3G15370 ATHEXP ALPHA... expansin 12 0.03 Archaeplastida
AT3G55500 EXPA16, ATHEXP... expansin A16 0.2 Archaeplastida
AT5G05290 EXPA2, ATHEXP... expansin A2 0.02 Archaeplastida
GSVIVT01007987001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01024572001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01033691001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 Archaeplastida
Gb_01500 No alias alpha-class expansin 0.02 Archaeplastida
Gb_01502 No alias alpha-class expansin 0.02 Archaeplastida
Gb_01505 No alias alpha-class expansin 0.03 Archaeplastida
Gb_01506 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_07424 No alias alpha-class expansin 0.06 Archaeplastida
Gb_07439 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os01g16770.1 No alias alpha-class expansin 0.01 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.01 Archaeplastida
LOC_Os03g06050.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g31480.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os04g15840.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os12g36040.1 No alias alpha-class expansin 0.01 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.01 Archaeplastida
MA_14588g0010 No alias alpha-class expansin 0.01 Archaeplastida
MA_18265g0010 No alias alpha-class expansin 0.01 Archaeplastida
MA_19117g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_651027g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_86877g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_8784268g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp1g22740.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g28890.1 No alias alpha-class expansin 0.07 Archaeplastida
Mp2g18600.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g06900.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g22690.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g24470.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp4g22180.1 No alias alpha-class expansin 0.01 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.04 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.01 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.02 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 Archaeplastida
Smo230202 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo90935 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc04g081870.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e010388_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e014220_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e014221_P001 No alias Expansin-A22 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e014247_P001 No alias Expansin-A23 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e017221_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.01 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 71 153
IPR007117 Expansin_CBD 166 241
No external refs found!