Description : DNA topoisomerase (TOP1)
Gene families : OG0003801 (Archaeplastida) Phylogenetic Tree(s): OG0003801_tree ,
OG_05_0003801 (LandPlants) Phylogenetic Tree(s): OG_05_0003801_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Mp6g05370.1 | |
Cluster | HCCA: Cluster_22 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G55300 | MGO1, TOP1, TOP1ALPHA | DNA topoisomerase I alpha | 0.05 | Archaeplastida | |
GSVIVT01020301001 | No alias | Cell cycle.interphase.DNA replication.preinitiation.TOP1... | 0.04 | Archaeplastida | |
LOC_Os08g05840.1 | No alias | DNA topoisomerase (TOP1) | 0.02 | Archaeplastida | |
MA_120434g0010 | No alias | DNA topoisomerase (TOP1) | 0.05 | Archaeplastida | |
Pp3c3_12300V3.1 | No alias | DNA topoisomerase 1 beta | 0.06 | Archaeplastida | |
Smo109207 | No alias | Cell cycle.interphase.DNA replication.preinitiation.TOP1... | 0.02 | Archaeplastida | |
Smo145504 | No alias | Cell cycle.interphase.DNA replication.preinitiation.TOP1... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003917 | DNA topoisomerase type I activity | IEA | Interproscan |
BP | GO:0006265 | DNA topological change | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
BP | GO:0016042 | lipid catabolic process | IEP | Neighborhood |
MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
No external refs found! |