1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G08560

AT4G08560 (PUM15, APUM15)


Aliases : PUM15, APUM15

Description : pumilio 15


Gene families : OG0006478 (Archaeplastida) Phylogenetic Tree(s): OG0006478_tree ,
OG_05_0004461 (LandPlants) Phylogenetic Tree(s): OG_05_0004461_tree ,
OG_06_0002874 (SeedPlants) Phylogenetic Tree(s): OG_06_0002874_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G08560

Target Alias Description ECC score Gene Family Method Actions
AT3G27329 No alias Plant self-incompatibility protein S1 family 0.04 Archaeplastida
AT3G27331 No alias Plant self-incompatibility protein S1 family 0.04 Archaeplastida
AT4G10895 No alias Plant self-incompatibility protein S1 family 0.1 Archaeplastida
AT5G04347 No alias Plant self-incompatibility protein S1 family 0.09 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 382 404
IPR010264 Self-incomp_S1 24 92
No external refs found!