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  5. Mp6g08590.1

Mp6g08590.1


Description : SUMO E3 ligase (SIZ1)


Gene families : OG0001463 (Archaeplastida) Phylogenetic Tree(s): OG0001463_tree ,
OG_05_0002028 (LandPlants) Phylogenetic Tree(s): OG_05_0002028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g08590.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AT5G60410 SIZ1, ATSIZ1 DNA-binding protein with MIZ/SP-RING zinc finger,... 0.02 Archaeplastida
Cre12.g500900 No alias Protein degradation.peptide... 0.02 Archaeplastida
GSVIVT01025151001 No alias Protein degradation.peptide... 0.03 Archaeplastida
Gb_29862 No alias SUMO E3 ligase (SIZ1) 0.04 Archaeplastida
Gb_39446 No alias SUMO E3 ligase (SIZ1) 0.03 Archaeplastida
LOC_Os03g50980.1 No alias SUMO E3 ligase (SIZ1) 0.04 Archaeplastida
LOC_Os05g03430.1 No alias SUMO E3 ligase (SIZ1) 0.03 Archaeplastida
Pp3c20_14153V3.1 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.04 Archaeplastida
Pp3c8_11400V3.1 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.05 Archaeplastida
Solyc06g010000.3.1 No alias SUMO E3 ligase (SIZ1) 0.03 Archaeplastida
Solyc11g069160.3.1 No alias SUMO E3 ligase (SIZ1) 0.08 Archaeplastida
Zm00001e020810_P002 No alias SUMO E3 ligase (SIZ1) 0.02 Archaeplastida
Zm00001e027582_P001 No alias SUMO E3 ligase (SIZ1) 0.05 Archaeplastida
Zm00001e029498_P003 No alias SUMO E3 ligase (SIZ1) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 124 177
IPR004181 Znf_MIZ 370 418
No external refs found!