1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G08910

AT4G08910


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78170.1); Has 68 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).


Gene families : OG0001362 (Archaeplastida) Phylogenetic Tree(s): OG0001362_tree ,
OG_05_0000882 (LandPlants) Phylogenetic Tree(s): OG_05_0000882_tree ,
OG_06_0002520 (SeedPlants) Phylogenetic Tree(s): OG_06_0002520_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G08910
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00161690 evm_27.TU.AmTr_v1... No description available 0.14 Archaeplastida
GSVIVT01000957001 No alias Cell wall.cutin and suberin.biosynthesis regulation.CFL regulator 0.05 Archaeplastida
Gb_29101 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_35362 No alias CFL cutin and suberin biosynthesis regulator 0.06 Archaeplastida
LOC_Os11g18940.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_941055g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c17_5610V3.1 No alias No annotation 0.01 Archaeplastida
Pp3c1_32020V3.1 No alias No annotation 0.03 Archaeplastida
Solyc04g074080.3.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e038823_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e039814_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001676 long-chain fatty acid metabolic process IEP Neighborhood
BP GO:0002213 defense response to insect IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003999 adenine phosphoribosyltransferase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004301 epoxide hydrolase activity IEP Neighborhood
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0010025 wax biosynthetic process IEP Neighborhood
BP GO:0010143 cutin biosynthetic process IEP Neighborhood
BP GO:0010166 wax metabolic process IEP Neighborhood
BP GO:0010311 lateral root formation IEP Neighborhood
MF GO:0015645 fatty acid ligase activity IEP Neighborhood
MF GO:0016405 CoA-ligase activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016801 hydrolase activity, acting on ether bonds IEP Neighborhood
MF GO:0016803 ether hydrolase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016878 acid-thiol ligase activity IEP Neighborhood
MF GO:0031957 very long-chain fatty acid-CoA ligase activity IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0106130 purine phosphoribosyltransferase activity IEP Neighborhood
BP GO:1901568 fatty acid derivative metabolic process IEP Neighborhood
BP GO:1901570 fatty acid derivative biosynthetic process IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!