- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : methylation reader (MBD1-4|12)
Gene families : OG0001540 (Archaeplastida) Phylogenetic Tree(s): OG0001540_tree ,
OG_05_0001399 (LandPlants) Phylogenetic Tree(s): OG_05_0001399_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp6g12830.1 | |
| Cluster | HCCA: Cluster_100 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os05g33550.1 | No alias | methylation reader (MBD1-4|12) | 0.02 | Archaeplastida | |
| MA_27424g0010 | No alias | methylation reader (MBD1-4|12) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Neighborhood |
| MF | GO:0004521 | endoribonuclease activity | IEP | Neighborhood |
| MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005576 | extracellular region | IEP | Neighborhood |
| CC | GO:0005618 | cell wall | IEP | Neighborhood |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006275 | regulation of DNA replication | IEP | Neighborhood |
| BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Neighborhood |
| BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Neighborhood |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Neighborhood |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
| CC | GO:0030312 | external encapsulating structure | IEP | Neighborhood |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
| CC | GO:0032993 | protein-DNA complex | IEP | Neighborhood |
| BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
| CC | GO:0044427 | chromosomal part | IEP | Neighborhood |
| CC | GO:0044815 | DNA packaging complex | IEP | Neighborhood |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
| CC | GO:0048046 | apoplast | IEP | Neighborhood |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011124 | Znf_CW | 25 | 72 |
| No external refs found! |