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  5. Mp6g16470.1

Mp6g16470.1


Description : regulatory component RPT2 of 26S proteasome


Gene families : OG0003745 (Archaeplastida) Phylogenetic Tree(s): OG0003745_tree ,
OG_05_0004265 (LandPlants) Phylogenetic Tree(s): OG_05_0004265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g16470.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00202640 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.regulatory... 0.02 Archaeplastida
AT2G20140 No alias AAA-type ATPase family protein 0.02 Archaeplastida
AT4G29040 RPT2a regulatory particle AAA-ATPase 2A 0.06 Archaeplastida
Cpa|evm.model.tig00001042.6 No alias Protein degradation.26S proteasome.regulatory... 0.07 Archaeplastida
Cre07.g329700 No alias Protein degradation.26S proteasome.regulatory... 0.12 Archaeplastida
GSVIVT01028520001 No alias Protein degradation.26S proteasome.regulatory... 0.04 Archaeplastida
LOC_Os03g18690.1 No alias regulatory component RPT2 of 26S proteasome 0.02 Archaeplastida
LOC_Os07g49150.1 No alias regulatory component RPT2 of 26S proteasome 0.09 Archaeplastida
MA_10431395g0010 No alias regulatory component RPT2 of 26S proteasome 0.02 Archaeplastida
MA_10434382g0020 No alias 26S proteasome regulatory subunit 4 homolog B... 0.03 Archaeplastida
Pp3c16_23220V3.1 No alias AAA-type ATPase family protein 0.02 Archaeplastida
Pp3c22_7710V3.1 No alias AAA-type ATPase family protein 0.07 Archaeplastida
Solyc06g083620.3.1 No alias regulatory component RPT2 of 26S proteasome 0.04 Archaeplastida
Zm00001e001356_P001 No alias regulatory component RPT2 of 26S proteasome 0.02 Archaeplastida
Zm00001e011018_P001 No alias regulatory component RPT2 of 26S proteasome 0.03 Archaeplastida
Zm00001e035935_P001 No alias regulatory component RPT2 of 26S proteasome 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005801 cis-Golgi network IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB 113 167
IPR003959 ATPase_AAA_core 226 359
No external refs found!