1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G09780

AT4G09780


Description : TRAF-like family protein


Gene families : OG0004283 (Archaeplastida) Phylogenetic Tree(s): OG0004283_tree ,
OG_05_0002958 (LandPlants) Phylogenetic Tree(s): OG_05_0002958_tree ,
OG_06_0001776 (SeedPlants) Phylogenetic Tree(s): OG_06_0001776_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G09780
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT1G58270 ZW9 TRAF-like family protein 0.04 Archaeplastida
AT2G04170 No alias TRAF-like family protein 0.05 Archaeplastida
AT2G04190 No alias TRAF-like family protein 0.04 Archaeplastida
AT3G20360 No alias TRAF-like family protein 0.03 Archaeplastida
AT3G20370 No alias TRAF-like family protein 0.04 Archaeplastida
AT3G20380 No alias TRAF-like family protein 0.09 Archaeplastida
AT3G28220 No alias TRAF-like family protein 0.04 Archaeplastida
AT3G46190 No alias TRAF-like family protein 0.04 Archaeplastida
AT5G26260 No alias TRAF-like family protein 0.04 Archaeplastida
AT5G26290 No alias TRAF-like family protein 0.03 Archaeplastida
AT5G26320 No alias TRAF-like family protein 0.09 Archaeplastida
GSVIVT01037800001 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01037805001 No alias No description available 0.03 Archaeplastida
Solyc07g049520.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004805 trehalose-phosphatase activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006824 cobalt ion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008493 tetracycline transmembrane transporter activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
BP GO:0009962 regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0010101 post-embryonic root morphogenesis IEP Neighborhood
BP GO:0010102 lateral root morphogenesis IEP Neighborhood
BP GO:0010106 cellular response to iron ion starvation IEP Neighborhood
BP GO:0010197 polar nucleus fusion IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015087 cobalt ion transmembrane transporter activity IEP Neighborhood
MF GO:0015099 nickel cation transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0015665 alcohol transmembrane transporter activity IEP Neighborhood
BP GO:0015675 nickel cation transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0042895 antibiotic transmembrane transporter activity IEP Neighborhood
BP GO:0055068 cobalt ion homeostasis IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP Neighborhood
BP GO:0080160 selenate transport IEP Neighborhood
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 72 194
IPR002083 MATH/TRAF_dom 219 349
No external refs found!