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  5. Mp6g17640.1

Mp6g17640.1


Description : poly(A) RNA polymerase (TRF4)


Gene families : OG0003562 (Archaeplastida) Phylogenetic Tree(s): OG0003562_tree ,
OG_05_0007100 (LandPlants) Phylogenetic Tree(s): OG_05_0007100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g17640.1
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cre09.g410500 No alias No description available 0.02 Archaeplastida
Cre17.g720750 No alias No description available 0.01 Archaeplastida
GSVIVT01014349001 No alias No description available 0.02 Archaeplastida
LOC_Os01g48210.1 No alias poly(A) RNA polymerase (TRF4) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001671 ATPase activator activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0030259 lipid glycosylation IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 225 278
IPR002058 PAP_assoc 388 444
No external refs found!