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  5. AT4G09870

AT4G09870


Description : F-box and associated interaction domains-containing protein


Gene families : OG0000467 (Archaeplastida) Phylogenetic Tree(s): OG0000467_tree ,
OG_05_0000234 (LandPlants) Phylogenetic Tree(s): OG_05_0000234_tree ,
OG_06_0000102 (SeedPlants) Phylogenetic Tree(s): OG_06_0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G09870
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT1G11810 No alias F-box associated ubiquitination effector family protein 0.07 Archaeplastida
AT1G59680 EDA1 F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT1G62270 No alias F-box and associated interaction domains-containing protein 0.18 Archaeplastida
AT1G65990 No alias type 2 peroxiredoxin-related / thiol specific... 0.06 Archaeplastida
AT1G67450 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT2G38590 No alias F-box and associated interaction domains-containing protein 0.15 Archaeplastida
AT2G39355 No alias No description available 0.05 Archaeplastida
AT3G03405 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida
AT3G04250 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida
AT3G08750 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G13680 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT3G16020 No alias F-box associated ubiquitination effector protein 0.02 Archaeplastida
AT3G16820 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G17280 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G17480 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT3G17500 No alias F-box family protein 0.18 Archaeplastida
AT3G17530 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G18330 No alias F-box family protein 0.07 Archaeplastida
AT3G19410 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT3G19470 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G19560 No alias F-box family protein 0.14 Archaeplastida
AT3G19880 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT3G19890 No alias F-box family protein 0.07 Archaeplastida
AT3G20030 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G20710 No alias F-box family protein 0.06 Archaeplastida
AT3G21120 No alias F-box and associated interaction domains-containing protein 0.16 Archaeplastida
AT3G21165 No alias No description available 0.07 Archaeplastida
AT3G22350 No alias F-box and associated interaction domains-containing protein 0.14 Archaeplastida
AT3G22421 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT3G22730 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT3G22770 No alias F-box associated ubiquitination effector family protein 0.07 Archaeplastida
AT3G22870 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT3G23680 No alias F-box associated ubiquitination effector family protein 0.06 Archaeplastida
AT3G24580 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G25090 No alias F-box associated ubiquitination effector family protein 0.07 Archaeplastida
AT3G49520 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT4G10190 No alias F-box and associated interaction domains-containing protein 0.11 Archaeplastida
AT4G17200 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G36200 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT5G36730 No alias F-box and associated interaction domains-containing protein 0.12 Archaeplastida
AT5G36820 No alias F-box and associated interaction domains-containing protein 0.12 Archaeplastida
AT5G41510 No alias F-box and associated interaction domains-containing protein 0.18 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Neighborhood
CC GO:0015935 small ribosomal subunit IEP Neighborhood
CC GO:0022627 cytosolic small ribosomal subunit IEP Neighborhood
BP GO:0030490 maturation of SSU-rRNA IEP Neighborhood
BP GO:1900457 regulation of brassinosteroid mediated signaling pathway IEP Neighborhood
BP GO:1900459 positive regulation of brassinosteroid mediated signaling pathway IEP Neighborhood
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 152 322
IPR001810 F-box_dom 1 42
No external refs found!