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  5. Mp6g19660.1

Mp6g19660.1


Description : heavy chain of clathrin triskelion


Gene families : OG0002049 (Archaeplastida) Phylogenetic Tree(s): OG0002049_tree ,
OG_05_0002345 (LandPlants) Phylogenetic Tree(s): OG_05_0002345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g19660.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00168430 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 Archaeplastida
AT3G08530 No alias Clathrin, heavy chain 0.04 Archaeplastida
AT3G11130 No alias Clathrin, heavy chain 0.07 Archaeplastida
Cpa|evm.model.tig00000042.11 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 Archaeplastida
GSVIVT01024708001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
GSVIVT01032792001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.11 Archaeplastida
Gb_33028 No alias heavy chain of clathrin triskelion 0.03 Archaeplastida
Gb_33029 No alias Clathrin heavy chain 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os11g01380.1 No alias heavy chain of clathrin triskelion 0.05 Archaeplastida
LOC_Os12g01390.1 No alias heavy chain of clathrin triskelion 0.03 Archaeplastida
MA_47260g0010 No alias Clathrin heavy chain 2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_5992036g0010 No alias Clathrin heavy chain 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Pp3c1_37710V3.1 No alias Clathrin, heavy chain 0.04 Archaeplastida
Smo149750 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
Solyc03g096000.3.1 No alias heavy chain of clathrin triskelion 0.06 Archaeplastida
Solyc05g052510.4.1 No alias heavy chain of clathrin triskelion 0.09 Archaeplastida
Solyc06g051310.3.1 No alias heavy chain of clathrin triskelion 0.07 Archaeplastida
Zm00001e009296_P003 No alias heavy chain of clathrin triskelion 0.05 Archaeplastida
Zm00001e020822_P001 No alias heavy chain of clathrin triskelion 0.06 Archaeplastida
Zm00001e023940_P002 No alias heavy chain of clathrin triskelion 0.05 Archaeplastida
Zm00001e039167_P001 No alias heavy chain of clathrin triskelion 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEA Interproscan
CC GO:0030132 clathrin coat of coated pit IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR015348 Clathrin_H-chain_linker_core 344 367
IPR000547 Clathrin_H-chain/VPS_repeat 555 692
IPR000547 Clathrin_H-chain/VPS_repeat 850 975
IPR000547 Clathrin_H-chain/VPS_repeat 993 1131
IPR000547 Clathrin_H-chain/VPS_repeat 1289 1431
IPR000547 Clathrin_H-chain/VPS_repeat 701 840
IPR000547 Clathrin_H-chain/VPS_repeat 1144 1281
IPR000547 Clathrin_H-chain/VPS_repeat 1437 1579
IPR022365 Clathrin_H-chain_propeller_rpt 155 197
IPR022365 Clathrin_H-chain_propeller_rpt 20 55
No external refs found!