Description : R-loop reader protein (ALBA1/2)
Gene families : OG0000764 (Archaeplastida) Phylogenetic Tree(s): OG0000764_tree ,
OG_05_0001543 (LandPlants) Phylogenetic Tree(s): OG_05_0001543_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Mp6g20280.1 | |
Cluster | HCCA: Cluster_119 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G04620 | No alias | Alba DNA/RNA-binding protein | 0.02 | Archaeplastida | |
Cre09.g401600 | No alias | Uncharacterized protein At2g34160 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
Pp3c12_20750V3.1 | No alias | Alba DNA/RNA-binding protein | 0.06 | Archaeplastida | |
Zm00001e016750_P002 | No alias | R-loop reader protein (ALBA1/2) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
MF | GO:0003954 | NADH dehydrogenase activity | IEP | Neighborhood |
MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005516 | calmodulin binding | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
CC | GO:0005783 | endoplasmic reticulum | IEP | Neighborhood |
CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
BP | GO:0006457 | protein folding | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
BP | GO:0009056 | catabolic process | IEP | Neighborhood |
BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Neighborhood |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Neighborhood |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Neighborhood |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
MF | GO:0042393 | histone binding | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Neighborhood |
MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002775 | DNA/RNA-bd_Alba-like | 28 | 80 |
No external refs found! |