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  5. AT4G10400

AT4G10400


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG0001094 (Archaeplastida) Phylogenetic Tree(s): OG0001094_tree ,
OG_05_0000663 (LandPlants) Phylogenetic Tree(s): OG_05_0000663_tree ,
OG_06_0000324 (SeedPlants) Phylogenetic Tree(s): OG_06_0000324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G10400
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AT1G19410 No alias FBD / Leucine Rich Repeat domains containing protein 0.03 Archaeplastida
AT1G32375 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT3G56780 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.04 Archaeplastida
AT5G11370 No alias FBD / Leucine Rich Repeat domains containing protein 0.02 Archaeplastida
AT5G50270 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000723 telomere maintenance IEP Neighborhood
BP GO:0000912 assembly of actomyosin apparatus involved in cytokinesis IEP Neighborhood
BP GO:0000914 phragmoplast assembly IEP Neighborhood
CC GO:0000932 P-body IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0004526 ribonuclease P activity IEP Neighborhood
MF GO:0004549 tRNA-specific ribonuclease activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0005456 CMP-N-acetylneuraminate transmembrane transporter activity IEP Neighborhood
CC GO:0005677 chromatin silencing complex IEP Neighborhood
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006342 chromatin silencing IEP Neighborhood
BP GO:0007020 microtubule nucleation IEP Neighborhood
BP GO:0007140 male meiotic nuclear division IEP Neighborhood
MF GO:0015136 sialic acid transmembrane transporter activity IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015739 sialic acid transport IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0016233 telomere capping IEP Neighborhood
BP GO:0016444 somatic cell DNA recombination IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
CC GO:0017053 transcriptional repressor complex IEP Neighborhood
BP GO:0031109 microtubule polymerization or depolymerization IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
MF GO:0032451 demethylase activity IEP Neighborhood
BP GO:0032504 multicellular organism reproduction IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
MF GO:0035514 DNA demethylase activity IEP Neighborhood
CC GO:0035770 ribonucleoprotein granule IEP Neighborhood
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Neighborhood
MF GO:0042162 telomeric DNA binding IEP Neighborhood
MF GO:0043047 single-stranded telomeric DNA binding IEP Neighborhood
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0046785 microtubule polymerization IEP Neighborhood
BP GO:0048768 root hair cell tip growth IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0071470 cellular response to osmotic stress IEP Neighborhood
BP GO:0071472 cellular response to salt stress IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090568 nuclear transcriptional repressor complex IEP Neighborhood
MF GO:0098847 sequence-specific single stranded DNA binding IEP Neighborhood
BP GO:0140013 meiotic nuclear division IEP Neighborhood
BP GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 37
IPR013101 Leu-rich_rpt_2 152 177
IPR006566 FBD 333 378
No external refs found!