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  5. Mp7g03840.1

Mp7g03840.1


Description : subunit beta of RAB-GTPase geranylgeranyltransferase (RGT) complex


Gene families : OG0004207 (Archaeplastida) Phylogenetic Tree(s): OG0004207_tree ,
OG_05_0003814 (LandPlants) Phylogenetic Tree(s): OG_05_0003814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g03840.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Solyc03g118570.4.1 No alias subunit beta of RAB-GTPase geranylgeranyltransferase... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
BP GO:0000723 telomere maintenance IEP Neighborhood
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004484 mRNA guanylyltransferase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005548 phospholipid transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007009 plasma membrane organization IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008192 RNA guanylyltransferase activity IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0009245 lipid A biosynthetic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
BP GO:0017121 phospholipid scrambling IEP Neighborhood
MF GO:0017128 phospholipid scramblase activity IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0019213 deacetylase activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034227 tRNA thio-modification IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044599 AP-5 adaptor complex IEP Neighborhood
BP GO:0045048 protein insertion into ER membrane IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046493 lipid A metabolic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051205 protein insertion into membrane IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
CC GO:0070531 BRCA1-A complex IEP Neighborhood
CC GO:0070552 BRISC complex IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097035 regulation of membrane lipid distribution IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901269 lipooligosaccharide metabolic process IEP Neighborhood
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001330 PFTB_repeat 248 291
IPR001330 PFTB_repeat 57 97
IPR001330 PFTB_repeat 201 243
IPR001330 PFTB_repeat 152 195
IPR001330 PFTB_repeat 105 146
No external refs found!