1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G10610

AT4G10610 (CID12, ATRBP37, RBP37)


Aliases : CID12, ATRBP37, RBP37

Description : CTC-interacting domain 12


Gene families : OG0000719 (Archaeplastida) Phylogenetic Tree(s): OG0000719_tree ,
OG_05_0001092 (LandPlants) Phylogenetic Tree(s): OG_05_0001092_tree ,
OG_06_0001085 (SeedPlants) Phylogenetic Tree(s): OG_06_0001085_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G10610
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00219700 evm_27.TU.AmTr_v1... Polyadenylate-binding protein-interacting protein 11... 0.03 Archaeplastida
Cpa|evm.model.tig00021537.5 No alias No description available 0.01 Archaeplastida
LOC_Os06g35030.3 No alias Polyadenylate-binding protein-interacting protein 11... 0.02 Archaeplastida
MA_4300g0010 No alias Polyadenylate-binding protein-interacting protein 12... 0.06 Archaeplastida
Smo56081 No alias Polyadenylate-binding protein-interacting protein 11... 0.02 Archaeplastida
Zm00001e037115_P002 No alias Polyadenylate-binding protein-interacting protein 11... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IDA Interproscan
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
BP GO:0000245 spliceosomal complex assembly IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0000822 inositol hexakisphosphate binding IEP Neighborhood
BP GO:0002237 response to molecule of bacterial origin IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009410 response to xenobiotic stimulus IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009612 response to mechanical stimulus IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009734 auxin-activated signaling pathway IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
MF GO:0010011 auxin binding IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010103 stomatal complex morphogenesis IEP Neighborhood
BP GO:0010152 pollen maturation IEP Neighborhood
BP GO:0010311 lateral root formation IEP Neighborhood
BP GO:0016036 cellular response to phosphate starvation IEP Neighborhood
CC GO:0016604 nuclear body IEP Neighborhood
CC GO:0016607 nuclear speck IEP Neighborhood
CC GO:0019005 SCF ubiquitin ligase complex IEP Neighborhood
BP GO:0019722 calcium-mediated signaling IEP Neighborhood
BP GO:0019932 second-messenger-mediated signaling IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
BP GO:0042752 regulation of circadian rhythm IEP Neighborhood
MF GO:0043178 alcohol binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Neighborhood
BP GO:0090626 plant epidermis morphogenesis IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 249 313
IPR000504 RRM_dom 152 214
IPR009818 Ataxin-2_C 74 87
No external refs found!