AT4G11140 (CRF1)


Aliases : CRF1

Description : cytokinin response factor 1


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0017034 (SeedPlants) Phylogenetic Tree(s): OG_06_0017034_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G11140
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00095120 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF110... 0.02 Archaeplastida
AMTR_s00021p00185480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00034p00206140 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00040p00180260 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00058p00066390 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 Archaeplastida
AMTR_s00095p00096190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT2G44940 No alias Integrase-type DNA-binding superfamily protein 0.06 Archaeplastida
AT2G47520 HRE2 Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT3G11020 DREB2B, DREB2 DRE/CRT-binding protein 2B 0.03 Archaeplastida
AT3G14230 RAP2.2 related to AP2 2 0.04 Archaeplastida
AT4G16750 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G23750 TMO3, CRF2 cytokinin response factor 2 0.04 Archaeplastida
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
Cre08.g364400 No alias No description available 0.03 Archaeplastida
GSVIVT01005747001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01013920001 No alias No description available 0.03 Archaeplastida
GSVIVT01015037001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01017315001 No alias Cell wall.cutin and suberin.biosynthesis... 0.05 Archaeplastida
GSVIVT01022076001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01022277001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01026334001 No alias Ethylene-responsive transcription factor ERF003... 0.03 Archaeplastida
GSVIVT01036201001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
Gb_08035 No alias transcription factor (DREB) 0.04 Archaeplastida
Gb_08437 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_09495 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Gb_19118 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_19320 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_41020 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os01g21120.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os02g10760.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
LOC_Os02g32140.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os02g43820.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os02g55380.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os03g08460.1 No alias Ethylene-responsive transcription factor ERF073... 0.02 Archaeplastida
LOC_Os03g08470.1 No alias Ethylene-responsive transcription factor 1 OS=Oryza... 0.03 Archaeplastida
LOC_Os04g32620.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os04g46220.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g46240.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os04g46250.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os05g28350.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os05g36100.1 No alias transcription factor (ERF) 0.05 Archaeplastida
LOC_Os05g49700.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os06g08340.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os07g12510.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os07g47790.1 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_10020434g0010 No alias Ethylene-responsive transcription factor ERF013... 0.03 Archaeplastida
MA_500288g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_54341g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
MA_647924g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_6677438g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_896002g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_9260020g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp4g00380.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c10_17870V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c14_3280V3.1 No alias cytokinin response factor 2 0.02 Archaeplastida
Pp3c16_3770V3.1 No alias erf domain protein 9 0.02 Archaeplastida
Pp3c25_1760V3.1 No alias related to AP2 11 0.02 Archaeplastida
Pp3c27_1350V3.1 No alias ERF domain protein 12 0.02 Archaeplastida
Solyc02g090790.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc03g006320.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc03g117230.1.1 No alias Ethylene-responsive transcription factor ERF084... 0.03 Archaeplastida
Solyc04g007170.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc04g072300.1.1 No alias Ethylene-responsive transcription factor FZP OS=Oryza... 0.02 Archaeplastida
Solyc05g050790.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc05g051180.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g066660.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc09g075420.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc09g089930.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc12g009490.3.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Zm00001e000608_P002 No alias Ethylene-responsive transcription factor ERF073... 0.03 Archaeplastida
Zm00001e000609_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e001139_P001 No alias Ethylene-responsive transcription factor ERF014... 0.03 Archaeplastida
Zm00001e003579_P001 No alias Ethylene-responsive transcription factor ERF015... 0.02 Archaeplastida
Zm00001e003858_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e007351_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e015314_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e017516_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e019026_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e020274_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e022016_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e023870_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e026192_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e031438_P002 No alias Ethylene-responsive transcription factor RAP2-3... 0.03 Archaeplastida
Zm00001e031497_P001 No alias Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.02 Archaeplastida
Zm00001e035837_P001 No alias transcription factor (ERF) 0.05 Archaeplastida
Zm00001e036130_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e036401_P001 No alias transcription factor (DREB) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
BP GO:0006406 mRNA export from nucleus RCA Interproscan
BP GO:0006606 protein import into nucleus RCA Interproscan
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process RCA Interproscan
BP GO:0009640 photomorphogenesis RCA Interproscan
BP GO:0009694 jasmonic acid metabolic process RCA Interproscan
BP GO:0009737 response to abscisic acid RCA Interproscan
BP GO:0009753 response to jasmonic acid RCA Interproscan
BP GO:0009793 embryo development ending in seed dormancy RCA Interproscan
BP GO:0009845 seed germination RCA Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0009933 meristem structural organization RCA Interproscan
BP GO:0010162 seed dormancy process RCA Interproscan
BP GO:0010182 sugar mediated signaling pathway RCA Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Interproscan
BP GO:0010564 regulation of cell cycle process RCA Interproscan
BP GO:0016567 protein ubiquitination RCA Interproscan
BP GO:0019915 lipid storage RCA Interproscan
BP GO:0042991 obsolete transcription factor import into nucleus IDA Interproscan
BP GO:0042991 obsolete transcription factor import into nucleus RCA Interproscan
BP GO:0048366 leaf development IMP Interproscan
BP GO:0048366 leaf development RCA Interproscan
BP GO:0048825 cotyledon development IMP Interproscan
BP GO:0048825 cotyledon development RCA Interproscan
BP GO:0050826 response to freezing RCA Interproscan
BP GO:0051301 cell division RCA Interproscan
Type GO Term Name Evidence Source
MF GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity IEP Neighborhood
MF GO:0004474 malate synthase activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009685 gibberellin metabolic process IEP Neighborhood
BP GO:0009686 gibberellin biosynthetic process IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009828 plant-type cell wall loosening IEP Neighborhood
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0016101 diterpenoid metabolic process IEP Neighborhood
BP GO:0016102 diterpenoid biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0032365 intracellular lipid transport IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046487 glyoxylate metabolic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 86 135
No external refs found!