1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp7g12640.1

Mp7g12640.1


Description : protease (Deg)


Gene families : OG0004157 (Archaeplastida) Phylogenetic Tree(s): OG0004157_tree ,
OG_05_0004285 (LandPlants) Phylogenetic Tree(s): OG_05_0004285_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g12640.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT3G03380 DegP7 DegP protease 7 0.02 Archaeplastida
Smo165477 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
Solyc02g091410.3.1 No alias protease (Deg) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006366 transcription by RNA polymerase II IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001478 PDZ 292 363
IPR025926 PDZ-like_dom 368 441
IPR025926 PDZ-like_dom 1005 1077
No external refs found!