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  5. Mp7g15600.1

Mp7g15600.1


Description : Flowering time control protein FCA OS=Arabidopsis thaliana (sp|o04425|fca_arath : 265.0)


Gene families : OG0001519 (Archaeplastida) Phylogenetic Tree(s): OG0001519_tree ,
OG_05_0004668 (LandPlants) Phylogenetic Tree(s): OG_05_0004668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g15600.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034966001 No alias Flowering time control protein FCA OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_00863 No alias no description available(sp|b8bcz8|fca_orysi : 290.0) 0.01 Archaeplastida
Gb_05124 No alias no description available(sp|b8bcz8|fca_orysi : 224.0) 0.02 Archaeplastida
LOC_Os09g03610.1 No alias no description available(sp|q6k271|fca_orysj : 775.0) 0.02 Archaeplastida
MA_5779g0010 No alias Flowering time control protein FCA OS=Arabidopsis... 0.02 Archaeplastida
Pp3c19_8230V3.1 No alias RNA-binding protein-defense related 1 0.02 Archaeplastida
Solyc09g074360.4.1 No alias RNA-binding protein BRN1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e009433_P002 No alias no description available(sp|b8bcz8|fca_orysi : 625.0) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003689 DNA clamp loader activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0043138 3'-5' DNA helicase activity IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 110 175
IPR000504 RRM_dom 657 727
IPR000504 RRM_dom 201 264
IPR001202 WW_dom 566 592
No external refs found!