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  5. Mp7g19710.1

Mp7g19710.1


Description : no hits & (original description: none)


Gene families : OG0003285 (Archaeplastida) Phylogenetic Tree(s): OG0003285_tree ,
OG_05_0003755 (LandPlants) Phylogenetic Tree(s): OG_05_0003755_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g19710.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270600 evm_27.TU.AmTr_v1... 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.06 Archaeplastida
AMTR_s00017p00234440 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
Cre04.g213905 No alias No description available 0.02 Archaeplastida
Gb_39308 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10430689g0020 No alias no hits & (original description: none) 0.07 Archaeplastida
Pp3c11_26720V3.1 No alias Splicing factor, CC1-like 0.03 Archaeplastida
Solyc11g005170.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e004710_P005 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e012773_P005 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038994_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 278 336
IPR000504 RRM_dom 595 647
IPR000504 RRM_dom 373 444
IPR029123 RBM39_linker 467 588
No external refs found!