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  5. Mp8g01420.1

Mp8g01420.1


Description : Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis thaliana (sp|q9sgh2|mbd9_arath : 335.0)


Gene families : OG0005252 (Archaeplastida) Phylogenetic Tree(s): OG0005252_tree ,
OG_05_0005859 (LandPlants) Phylogenetic Tree(s): OG_05_0005859_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g01420.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AT3G01460 ATMBD9, MBD9 methyl-CPG-binding domain 9 0.06 Archaeplastida
Gb_22434 No alias Methyl-CpG-binding domain-containing protein 9... 0.02 Archaeplastida
MA_10426475g0010 No alias Methyl-CpG-binding domain-containing protein 9... 0.04 Archaeplastida
MA_10435977g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10435977g0020 No alias Methyl-CpG-binding domain-containing protein 9... 0.08 Archaeplastida
MA_41907g0010 No alias Methyl-CpG-binding domain-containing protein 9... 0.08 Archaeplastida
Pp3c1_860V3.1 No alias methyl-CPG-binding domain 9 0.05 Archaeplastida
Pp3c2_35750V3.1 No alias methyl-CPG-binding domain 9 0.04 Archaeplastida
Pp3c6_8120V3.1 No alias methyl-CPG-binding domain 9 0.1 Archaeplastida
Solyc05g005640.4.1 No alias Methyl-CpG-binding domain-containing protein 9... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR028941 WHIM2_dom 2288 2435
IPR019787 Znf_PHD-finger 1858 1903
IPR019787 Znf_PHD-finger 171 218
IPR001739 Methyl_CpG_DNA-bd 784 826
IPR018501 DDT_dom 1255 1294
IPR028942 WHIM1_dom 1960 2001
No external refs found!