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  5. AT4G12820

AT4G12820


Description : F-box family protein with a domain of unknown function (DUF295)


Gene families : OG0002951 (Archaeplastida) Phylogenetic Tree(s): OG0002951_tree ,
OG_05_0001985 (LandPlants) Phylogenetic Tree(s): OG_05_0001985_tree ,
OG_06_0001108 (SeedPlants) Phylogenetic Tree(s): OG_06_0001108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G12820
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G10110 No alias F-box family protein 0.03 Archaeplastida
AT1G67160 No alias F-box family protein with a domain of unknown function (DUF295) 0.05 Archaeplastida
AT2G03560 No alias F-box family protein with a domain of unknown function (DUF295) 0.06 Archaeplastida
AT2G03610 No alias F-box family protein 0.04 Archaeplastida
AT2G04810 No alias Protein of unknown function (DUF295) 0.12 Archaeplastida
AT2G04830 No alias Protein of unknown function (DUF295) 0.11 Archaeplastida
AT2G05970 No alias F-box family protein with a domain of unknown function (DUF295) 0.07 Archaeplastida
AT2G14500 No alias F-box family protein 0.04 Archaeplastida
AT2G33190 No alias F-box family protein with a domain of unknown function (DUF295) 0.05 Archaeplastida
AT4G10820 No alias F-box family protein 0.04 Archaeplastida
AT4G14165 No alias F-box family protein-related 0.07 Archaeplastida
AT4G22060 No alias F-box family protein with a domain of unknown function (DUF295) 0.08 Archaeplastida
AT4G22165 No alias F-box family protein with a domain of unknown function (DUF295) 0.11 Archaeplastida
AT4G22170 No alias F-box family protein with a domain of unknown function (DUF295) 0.02 Archaeplastida
AT5G38270 No alias F-box family protein 0.02 Archaeplastida
AT5G66830 No alias F-box family protein with a domain of unknown function (DUF295) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005351 carbohydrate:proton symporter activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0005402 carbohydrate:cation symporter activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Neighborhood
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015695 organic cation transport IEP Neighborhood
BP GO:0015749 monosaccharide transmembrane transport IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0018126 protein hydroxylation IEP Neighborhood
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP Neighborhood
BP GO:0019471 4-hydroxyproline metabolic process IEP Neighborhood
BP GO:0019511 peptidyl-proline hydroxylation IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0034219 carbohydrate transmembrane transport IEP Neighborhood
MF GO:0051119 sugar transmembrane transporter activity IEP Neighborhood
BP GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain IEP Neighborhood
BP GO:0072488 ammonium transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR005174 DUF295 354 405
No external refs found!