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AT4G13490


Description : RING/U-box superfamily protein


Gene families : OG0002134 (Archaeplastida) Phylogenetic Tree(s): OG0002134_tree ,
OG_05_0001769 (LandPlants) Phylogenetic Tree(s): OG_05_0001769_tree ,
OG_06_0002062 (SeedPlants) Phylogenetic Tree(s): OG_06_0002062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G13490
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Mp3g20610.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Neighborhood
MF GO:0004156 dihydropteroate synthase activity IEP Neighborhood
MF GO:0004564 beta-fructofuranosidase activity IEP Neighborhood
MF GO:0004805 trehalose-phosphatase activity IEP Neighborhood
MF GO:0005355 glucose transmembrane transporter activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
MF GO:0008460 dTDP-glucose 4,6-dehydratase activity IEP Neighborhood
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Neighborhood
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
BP GO:0010466 negative regulation of peptidase activity IEP Neighborhood
BP GO:0010951 negative regulation of endopeptidase activity IEP Neighborhood
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015149 hexose transmembrane transporter activity IEP Neighborhood
MF GO:0015152 glucose-6-phosphate transmembrane transporter activity IEP Neighborhood
BP GO:0015712 hexose phosphate transport IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019305 dTDP-rhamnose biosynthetic process IEP Neighborhood
BP GO:0030162 regulation of proteolysis IEP Neighborhood
BP GO:0030656 regulation of vitamin metabolic process IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
MF GO:0045544 gibberellin 20-oxidase activity IEP Neighborhood
BP GO:0045861 negative regulation of proteolysis IEP Neighborhood
BP GO:0045912 negative regulation of carbohydrate metabolic process IEP Neighborhood
BP GO:0046137 negative regulation of vitamin metabolic process IEP Neighborhood
BP GO:0046383 dTDP-rhamnose metabolic process IEP Neighborhood
BP GO:0046653 tetrahydrofolate metabolic process IEP Neighborhood
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Neighborhood
MF GO:0048040 UDP-glucuronate decarboxylase activity IEP Neighborhood
BP GO:0051195 negative regulation of cofactor metabolic process IEP Neighborhood
BP GO:0051196 regulation of coenzyme metabolic process IEP Neighborhood
BP GO:0051198 negative regulation of coenzyme metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051346 negative regulation of hydrolase activity IEP Neighborhood
BP GO:0052547 regulation of peptidase activity IEP Neighborhood
BP GO:0052548 regulation of endopeptidase activity IEP Neighborhood
BP GO:0062014 negative regulation of small molecule metabolic process IEP Neighborhood
MF GO:0080031 methyl salicylate esterase activity IEP Neighborhood
BP GO:2000082 regulation of L-ascorbic acid biosynthetic process IEP Neighborhood
BP GO:2000083 negative regulation of L-ascorbic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 21 52
No external refs found!