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  5. Mp8g16600.1

Mp8g16600.1


Description : component TAF15 of TFIId basal transcription regulation complex


Gene families : OG0006677 (Archaeplastida) Phylogenetic Tree(s): OG0006677_tree ,
OG_05_0007121 (LandPlants) Phylogenetic Tree(s): OG_05_0007121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g16600.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00107550 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
Cpa|evm.model.tig00000194.52 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
GSVIVT01010206001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.11 Archaeplastida
Gb_28670 No alias component TAF15 of TFIId basal transcription regulation complex 0.05 Archaeplastida
LOC_Os07g19560.1 No alias component TAF15 of TFIId basal transcription regulation complex 0.04 Archaeplastida
LOC_Os09g12800.1 No alias component TAF15 of TFIId basal transcription regulation complex 0.03 Archaeplastida
Pp3c17_960V3.1 No alias TBP-associated factor 15 0.06 Archaeplastida
Solyc11g040050.3.1 No alias component TAF15 of TFIId basal transcription regulation complex 0.05 Archaeplastida
Zm00001e010307_P004 No alias component TAF15 of TFIId basal transcription regulation complex 0.04 Archaeplastida
Zm00001e034916_P002 No alias component TAF15 of TFIId basal transcription regulation complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003917 DNA topoisomerase type I activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
CC GO:0043189 H4/H2A histone acetyltransferase complex IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1902562 H4 histone acetyltransferase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 15 91
IPR001876 Znf_RanBP2 174 203
IPR001876 Znf_RanBP2 245 271
No external refs found!