Mp8g17270.1


Description : component RFC1 of PCNA sliding clamp loader complex


Gene families : OG0005946 (Archaeplastida) Phylogenetic Tree(s): OG0005946_tree ,
OG_05_0008329 (LandPlants) Phylogenetic Tree(s): OG_05_0008329_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g17270.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
LOC_Os11g36390.1 No alias component RFC1 of PCNA sliding clamp loader complex 0.02 Archaeplastida
Solyc07g005880.3.1 No alias component RFC1 of PCNA sliding clamp loader complex 0.04 Archaeplastida
Zm00001e011234_P001 No alias component RFC1 of PCNA sliding clamp loader complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003689 DNA clamp loader activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005663 DNA replication factor C complex IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Neighborhood
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0004000 adenosine deaminase activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0008915 lipid-A-disaccharide synthase activity IEP Neighborhood
BP GO:0009245 lipid A biosynthetic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
MF GO:0019781 NEDD8 activating enzyme activity IEP Neighborhood
MF GO:0019905 syntaxin binding IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045116 protein neddylation IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046493 lipid A metabolic process IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:1901269 lipooligosaccharide metabolic process IEP Neighborhood
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 461 579
IPR013725 DNA_replication_fac_RFC1_C 734 896
IPR001357 BRCT_dom 259 332
No external refs found!