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  5. AT4G13600

AT4G13600


Description : Carbohydrate-binding X8 domain superfamily protein


Gene families : OG0000145 (Archaeplastida) Phylogenetic Tree(s): OG0000145_tree ,
OG_05_0000072 (LandPlants) Phylogenetic Tree(s): OG_05_0000072_tree ,
OG_06_0000086 (SeedPlants) Phylogenetic Tree(s): OG_06_0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G13600
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00163410 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00045p00081920 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 Archaeplastida
AMTR_s00086p00121550 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00092p00035570 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.07 Archaeplastida
AMTR_s00110p00143620 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G09460 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 Archaeplastida
AT1G26450 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 Archaeplastida
AT1G69295 PDCB4 plasmodesmata callose-binding protein 4 0.05 Archaeplastida
AT1G78520 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 Archaeplastida
AT5G63240 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 Archaeplastida
AT5G63250 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 Archaeplastida
GSVIVT01007873001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01014068001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea 0.03 Archaeplastida
GSVIVT01015894001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01021055001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01021386001 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01021583001 No alias Pentatricopeptide repeat-containing protein At2g17525,... 0.04 Archaeplastida
GSVIVT01036726001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_15010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os03g30830.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g61780.1 No alias Major pollen allergen Ole e 10 OS=Olea europaea... 0.06 Archaeplastida
LOC_Os04g58555.1 No alias Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.03 Archaeplastida
LOC_Os05g50490.3 No alias Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os06g34660.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os06g45450.1 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os07g40940.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 Archaeplastida
MA_210389g0010 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.03 Archaeplastida
MA_8718849g0010 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.04 Archaeplastida
Smo29014 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo59691 No alias Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc01g101120.4.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc02g071200.4.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.06 Archaeplastida
Solyc03g115200.3.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.09 Archaeplastida
Solyc05g016390.4.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g047710.3.1 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.05 Archaeplastida
Solyc09g091920.3.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.05 Archaeplastida
Solyc12g017360.3.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.07 Archaeplastida
Solyc12g098410.2.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e010706_P001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e020392_P001 No alias Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e021782_P001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.04 Archaeplastida
Zm00001e022608_P001 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e027936_P001 No alias Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e035487_P001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e037118_P002 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0010065 primary meristem tissue development IEP Neighborhood
BP GO:0010067 procambium histogenesis IEP Neighborhood
BP GO:0010087 phloem or xylem histogenesis IEP Neighborhood
BP GO:0010226 response to lithium ion IEP Neighborhood
BP GO:0010229 inflorescence development IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0048507 meristem development IEP Neighborhood
BP GO:0048508 embryonic meristem development IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012946 X8 61 130
No external refs found!