AT4G13820

Description : Leucine-rich repeat (LRR) family protein

Gene families : OG0003515 (Archaeplastida) Phylogenetic Tree(s): OG0003515_tree ,
OG_05_0003123 (LandPlants) Phylogenetic Tree(s): OG_05_0003123_tree ,
OG_06_0001896 (SeedPlants) Phylogenetic Tree(s): OG_06_0001896_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G13820
Cluster	HCCA: Cluster_169

Target	Alias	Description	ECC score	Gene Family Method
AT2G15042	No alias	Leucine-rich repeat (LRR) family protein	0.03	Archaeplastida
AT5G27060	RLP53, AtRLP53	receptor like protein 53	0.04	Archaeplastida
Solyc06g033920.1.1	No alias	no description available(sp\|q9srl2\|rlp34_arath : 384.0)	0.03	Archaeplastida
Solyc08g077740.1.1	No alias	Receptor-like protein Cf-9 homolog OS=Solanum...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	None	Extended
BP	GO:0000302	response to reactive oxygen species	None	Extended
BP	GO:0000303	response to superoxide	RCA	Interproscan
BP	GO:0000305	response to oxygen radical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0007165	signal transduction	IC	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008219	cell death	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009863	salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009873	ethylene-activated signaling pathway	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016301	kinase activity	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Neighborhood
BP	GO:0000304	response to singlet oxygen	IEP	Neighborhood
BP	GO:0001666	response to hypoxia	IEP	Neighborhood
BP	GO:0002239	response to oomycetes	IEP	Neighborhood
BP	GO:0002376	immune system process	IEP	Neighborhood
MF	GO:0004022	alcohol dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004806	triglyceride lipase activity	IEP	Neighborhood
CC	GO:0005667	transcription factor complex	IEP	Neighborhood
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006814	sodium ion transport	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0006955	immune response	IEP	Neighborhood
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Neighborhood
BP	GO:0007584	response to nutrient	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009607	response to biotic stimulus	IEP	Neighborhood
BP	GO:0009620	response to fungus	IEP	Neighborhood
BP	GO:0009626	plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0009627	systemic acquired resistance	IEP	Neighborhood
BP	GO:0009696	salicylic acid metabolic process	IEP	Neighborhood
BP	GO:0009697	salicylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0009808	lignin metabolic process	IEP	Neighborhood
BP	GO:0009809	lignin biosynthetic process	IEP	Neighborhood
BP	GO:0009814	defense response, incompatible interaction	IEP	Neighborhood
BP	GO:0009817	defense response to fungus, incompatible interaction	IEP	Neighborhood
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009991	response to extracellular stimulus	IEP	Neighborhood
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	Neighborhood
BP	GO:0010618	aerenchyma formation	IEP	Neighborhood
BP	GO:0010942	positive regulation of cell death	IEP	Neighborhood
MF	GO:0015081	sodium ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015204	urea transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015370	solute:sodium symporter activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
CC	GO:0016602	CCAAT-binding factor complex	IEP	Neighborhood
BP	GO:0016999	antibiotic metabolic process	IEP	Neighborhood
BP	GO:0017000	antibiotic biosynthetic process	IEP	Neighborhood
BP	GO:0018958	phenol-containing compound metabolic process	IEP	Neighborhood
MF	GO:0019904	protein domain specific binding	IEP	Neighborhood
MF	GO:0030275	LRR domain binding	IEP	Neighborhood
BP	GO:0031667	response to nutrient levels	IEP	Neighborhood
BP	GO:0034050	host programmed cell death induced by symbiont	IEP	Neighborhood
BP	GO:0035725	sodium ion transmembrane transport	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0036293	response to decreased oxygen levels	IEP	Neighborhood
BP	GO:0042537	benzene-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042742	defense response to bacterium	IEP	Neighborhood
BP	GO:0043207	response to external biotic stimulus	IEP	Neighborhood
BP	GO:0043562	cellular response to nitrogen levels	IEP	Neighborhood
CC	GO:0044798	nuclear transcription factor complex	IEP	Neighborhood
BP	GO:0045087	innate immune response	IEP	Neighborhood
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEP	Neighborhood
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0046283	anthocyanin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0050832	defense response to fungus	IEP	Neighborhood
BP	GO:0051193	regulation of cofactor metabolic process	IEP	Neighborhood
BP	GO:0051704	multi-organism process	IEP	Neighborhood
BP	GO:0051707	response to other organism	IEP	Neighborhood
BP	GO:0070482	response to oxygen levels	IEP	Neighborhood
CC	GO:0090575	RNA polymerase II transcription factor complex	IEP	Neighborhood
BP	GO:0098542	defense response to other organism	IEP	Neighborhood
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013210	LRR_N_plant-typ	31	78
IPR001611	Leu-rich_rpt	494	515
IPR001611	Leu-rich_rpt	134	155
IPR001611	Leu-rich_rpt	541	563

External Links

No external refs found!

AT4G13820

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation