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  5. Pp3c10_12300V3.1

Pp3c10_12300V3.1


Description : plastid transcriptionally active 12


Gene families : OG0007706 (Archaeplastida) Phylogenetic Tree(s): OG0007706_tree ,
OG_05_0007174 (LandPlants) Phylogenetic Tree(s): OG_05_0007174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_12300V3.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AT2G34640 PTAC12, HMR plastid transcriptionally active 12 0.04 Archaeplastida
Mp1g24680.1 No alias PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.02 Archaeplastida
Solyc02g070390.3.1 No alias PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!