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  5. Pp3c10_17080V3.1

Pp3c10_17080V3.1


Description : actin 7


Gene families : OG0000334 (Archaeplastida) Phylogenetic Tree(s): OG0000334_tree ,
OG_05_0000214 (LandPlants) Phylogenetic Tree(s): OG_05_0000214_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_17080V3.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00045700 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin filament protein 0.03 Archaeplastida
GSVIVT01003099001 No alias Actin-1 OS=Oryza sativa subsp. indica 0.02 Archaeplastida
GSVIVT01026580001 No alias Cytoskeleton.microfilament network.actin filament protein 0.06 Archaeplastida
Gb_24792 No alias actin filament protein 0.02 Archaeplastida
Gb_25131 No alias actin filament protein 0.02 Archaeplastida
LOC_Os12g44350.1 No alias actin filament protein 0.03 Archaeplastida
Mp6g10990.1 No alias actin filament protein 0.02 Archaeplastida
Mp6g11010.1 No alias actin filament protein 0.03 Archaeplastida
Solyc01g104770.4.1 No alias actin filament protein 0.04 Archaeplastida
Solyc03g078400.3.1 No alias actin filament protein 0.03 Archaeplastida
Solyc06g076090.3.1 No alias actin filament protein 0.02 Archaeplastida
Solyc10g086460.2.1 No alias actin filament protein 0.04 Archaeplastida
Solyc11g005330.2.1 No alias actin filament protein 0.09 Archaeplastida
Zm00001e026977_P001 No alias actin filament protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004000 Actin 6 378
No external refs found!