1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c10_18650V3.1

Pp3c10_18650V3.1


Description : Pectin lyase-like superfamily protein


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0087396 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_18650V3.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00007p00264470 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00027p00247950 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00056p00166920 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00116p00025230 evm_27.TU.AmTr_v1... Probable pectinesterase 8 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00123p00050980 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AT1G11370 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT1G69940 ATPPME1, PPME1 Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT2G19150 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT2G21610 ATPE11, PE11 pectinesterase 11 0.03 Archaeplastida
AT2G36710 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
AT5G07430 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT5G18990 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT5G19730 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT5G26810 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
GSVIVT01014641001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01023786001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01034985001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Gb_01460 No alias pectin methylesterase 0.02 Archaeplastida
Gb_17798 No alias pectin methylesterase 0.02 Archaeplastida
Gb_27225 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os05g44600.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os11g45730.1 No alias pectin methylesterase 0.02 Archaeplastida
MA_10267810g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_10428610g0020 No alias pectin methylesterase 0.02 Archaeplastida
MA_14449g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_19196g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_304854g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_66089g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_87592g0010 No alias pectin methylesterase 0.02 Archaeplastida
Mp1g17560.1 No alias pectin methylesterase 0.02 Archaeplastida
Mp2g01420.1 No alias pectin methylesterase 0.02 Archaeplastida
Mp4g01190.1 No alias pectin methylesterase 0.03 Archaeplastida
Pp3c10_19460V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c12_23790V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c12_24000V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c19_8330V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c1_6010V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c25_3840V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c3_24830V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_30560V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c3_32350V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c3_35040V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c3_35240V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c5_12820V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c8_1680V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Solyc01g079180.4.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc01g109740.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc02g075620.4.1 No alias pectin methylesterase 0.01 Archaeplastida
Solyc04g080530.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc07g043240.4.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc08g078640.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc09g091730.4.1 No alias pectin methylesterase 0.01 Archaeplastida
Solyc10g083820.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e020795_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e035522_P001 No alias pectin methylesterase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006879 cellular iron ion homeostasis IEP Neighborhood
MF GO:0008199 ferric iron binding IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055072 iron ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!