1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c10_20140V3.1

Pp3c10_20140V3.1


Description : Pectin lyase-like superfamily protein


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_20140V3.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00186640 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
AMTR_s00039p00189000 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
AMTR_s00078p00106380 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.05 Archaeplastida
AMTR_s00120p00111300 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
AT1G04680 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT1G11920 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT1G14420 AT59 Pectate lyase family protein 0.04 Archaeplastida
AT1G67750 No alias Pectate lyase family protein 0.02 Archaeplastida
AT2G02720 No alias Pectate lyase family protein 0.04 Archaeplastida
AT3G01270 No alias Pectate lyase family protein 0.04 Archaeplastida
AT3G07010 No alias Pectin lyase-like superfamily protein 0.09 Archaeplastida
AT3G24230 No alias Pectate lyase family protein 0.04 Archaeplastida
AT3G24670 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G27400 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT3G53190 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT4G13210 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT4G22080 RHS14 root hair specific 14 0.05 Archaeplastida
AT5G15110 No alias Pectate lyase family protein 0.02 Archaeplastida
AT5G48900 No alias Pectin lyase-like superfamily protein 0.07 Archaeplastida
AT5G55720 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT5G63180 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01000592001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
GSVIVT01008053001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.05 Archaeplastida
GSVIVT01011348001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
GSVIVT01014682001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
GSVIVT01016208001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
GSVIVT01016209001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01020067001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.05 Archaeplastida
GSVIVT01020068001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.05 Archaeplastida
GSVIVT01024239001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
GSVIVT01029048001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
Gb_02248 No alias pectate lyase 0.04 Archaeplastida
Gb_04024 No alias Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_12278 No alias pectate lyase 0.01 Archaeplastida
Gb_19802 No alias pectate lyase 0.02 Archaeplastida
LOC_Os02g12300.1 No alias pectate lyase 0.05 Archaeplastida
LOC_Os04g05050.1 No alias pectate lyase 0.09 Archaeplastida
LOC_Os06g05209.1 No alias pectate lyase 0.02 Archaeplastida
LOC_Os06g05260.1 No alias pectate lyase 0.03 Archaeplastida
LOC_Os06g38510.2 No alias pectate lyase 0.04 Archaeplastida
LOC_Os10g31910.1 No alias pectate lyase 0.04 Archaeplastida
MA_101171g0010 No alias pectate lyase 0.04 Archaeplastida
MA_10205415g0010 No alias pectate lyase 0.03 Archaeplastida
MA_10353668g0010 No alias pectate lyase 0.03 Archaeplastida
MA_10426822g0020 No alias pectate lyase 0.04 Archaeplastida
MA_10429028g0020 No alias pectate lyase 0.01 Archaeplastida
MA_10430145g0020 No alias pectate lyase 0.04 Archaeplastida
MA_10430145g0030 No alias pectate lyase 0.04 Archaeplastida
MA_10437227g0010 No alias pectate lyase 0.03 Archaeplastida
MA_10437227g0020 No alias pectate lyase 0.02 Archaeplastida
MA_10437227g0030 No alias pectate lyase 0.03 Archaeplastida
MA_163033g0010 No alias pectate lyase 0.03 Archaeplastida
MA_170547g0010 No alias pectate lyase 0.02 Archaeplastida
MA_203992g0010 No alias pectate lyase 0.07 Archaeplastida
MA_204440g0010 No alias Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.04 Archaeplastida
MA_476625g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_52869g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_62112g0010 No alias pectate lyase 0.04 Archaeplastida
MA_66914g0010 No alias pectate lyase 0.08 Archaeplastida
MA_91467g0010 No alias pectate lyase 0.03 Archaeplastida
MA_91467g0020 No alias pectate lyase 0.03 Archaeplastida
MA_956526g0010 No alias pectate lyase 0.03 Archaeplastida
MA_97947g0010 No alias pectate lyase 0.03 Archaeplastida
Mp3g01000.1 No alias pectate lyase 0.01 Archaeplastida
Mp8g00770.1 No alias pectate lyase 0.06 Archaeplastida
Mp8g10190.1 No alias pectate lyase 0.03 Archaeplastida
Pp3c13_1640V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c14_6710V3.1 No alias Pectin lyase-like superfamily protein 0.08 Archaeplastida
Pp3c15_19060V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c1_35100V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c1_4040V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c22_19760V3.1 No alias Pectate lyase family protein 0.04 Archaeplastida
Pp3c22_19780V3.1 No alias Pectate lyase family protein 0.04 Archaeplastida
Pp3c2_9460V3.1 No alias Pectate lyase family protein 0.04 Archaeplastida
Smo407495 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.07 Archaeplastida
Smo439243 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
Smo81909 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
Solyc01g010740.4.1 No alias pectate lyase 0.03 Archaeplastida
Solyc02g080910.4.1 No alias pectate lyase 0.03 Archaeplastida
Solyc02g093580.4.1 No alias pectate lyase 0.06 Archaeplastida
Solyc03g058890.4.1 No alias pectate lyase 0.02 Archaeplastida
Solyc03g071570.3.1 No alias pectate lyase 0.03 Archaeplastida
Solyc03g111690.4.1 No alias pectate lyase 0.03 Archaeplastida
Solyc03g113150.3.1 No alias pectate lyase 0.03 Archaeplastida
Solyc05g007080.4.1 No alias pectate lyase 0.02 Archaeplastida
Solyc05g014000.4.1 No alias pectate lyase 0.04 Archaeplastida
Solyc06g071840.3.1 No alias Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc06g083580.4.1 No alias pectate lyase 0.07 Archaeplastida
Solyc09g061890.3.1 No alias pectate lyase 0.04 Archaeplastida
Solyc11g008140.3.1 No alias pectate lyase 0.03 Archaeplastida
Zm00001e024959_P001 No alias pectate lyase 0.04 Archaeplastida
Zm00001e030632_P001 No alias pectate lyase 0.03 Archaeplastida
Zm00001e037311_P001 No alias pectate lyase 0.03 Archaeplastida
Zm00001e040624_P001 No alias pectate lyase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!