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  5. Pp3c10_21550V3.1

Pp3c10_21550V3.1


Description : NOT2 / NOT3 / NOT5 family


Gene families : OG0002697 (Archaeplastida) Phylogenetic Tree(s): OG0002697_tree ,
OG_05_0002794 (LandPlants) Phylogenetic Tree(s): OG_05_0002794_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_21550V3.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00180540 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.04 Archaeplastida
AT1G07705 No alias NOT2 / NOT3 / NOT5 family 0.03 Archaeplastida
AT5G59710 VIP2, AtVIP2 VIRE2 interacting protein 2 0.02 Archaeplastida
Cpa|evm.model.tig00020554.138 No alias RNA processing.RNA decay.deadenylation-dependent... 0.02 Archaeplastida
Cre06.g309050 No alias RNA processing.RNA decay.deadenylation-dependent... 0.04 Archaeplastida
GSVIVT01025059001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.05 Archaeplastida
Gb_27080 No alias component NOT2 of mRNA deadenylation CCR4-NOT complex 0.02 Archaeplastida
LOC_Os03g52594.4 No alias component NOT2 of mRNA deadenylation CCR4-NOT complex 0.02 Archaeplastida
MA_102279g0010 No alias component NOT2 of mRNA deadenylation CCR4-NOT complex 0.02 Archaeplastida
MA_19243g0010 No alias component NOT2 of mRNA deadenylation CCR4-NOT complex 0.04 Archaeplastida
Mp1g21150.1 No alias component NOT2 of mRNA deadenylation CCR4-NOT complex 0.05 Archaeplastida
Smo430429 No alias RNA processing.RNA decay.deadenylation-dependent... 0.04 Archaeplastida
Solyc06g075590.4.1 No alias component NOT2 of mRNA deadenylation CCR4-NOT complex 0.06 Archaeplastida
Solyc11g072940.2.1 No alias component NOT2 of mRNA deadenylation CCR4-NOT complex 0.03 Archaeplastida
Zm00001e031975_P003 No alias component NOT2 of mRNA deadenylation CCR4-NOT complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
MF GO:0048365 Rac GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!