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Aliases : emb2739
Description : embryo defective 2739
Gene families : OG0007678 (Archaeplastida) Phylogenetic Tree(s): OG0007678_tree ,
OG_05_0007094 (LandPlants) Phylogenetic Tree(s): OG_05_0007094_tree ,
OG_06_0007674 (SeedPlants) Phylogenetic Tree(s): OG_06_0007674_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G14590 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os11g07030.1 | No alias | component DSP2 of DSP snRNA processing complex | 0.01 | Archaeplastida | |
| Zm00001e009045_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0009793 | embryo development ending in seed dormancy | NAS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000374 | Group III intron splicing | IEP | Neighborhood |
| MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
| MF | GO:0003964 | RNA-directed DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
| CC | GO:0005739 | mitochondrion | IEP | Neighborhood |
| CC | GO:0005851 | eukaryotic translation initiation factor 2B complex | IEP | Neighborhood |
| BP | GO:0006278 | RNA-dependent DNA biosynthetic process | IEP | Neighborhood |
| BP | GO:0006302 | double-strand break repair | IEP | Neighborhood |
| BP | GO:0006310 | DNA recombination | IEP | Neighborhood |
| BP | GO:0006446 | regulation of translational initiation | IEP | Neighborhood |
| BP | GO:0007143 | female meiotic nuclear division | IEP | Neighborhood |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0009410 | response to xenobiotic stimulus | IEP | Neighborhood |
| BP | GO:0009956 | radial pattern formation | IEP | Neighborhood |
| BP | GO:0010018 | far-red light signaling pathway | IEP | Neighborhood |
| BP | GO:0010496 | intercellular transport | IEP | Neighborhood |
| BP | GO:0017148 | negative regulation of translation | IEP | Neighborhood |
| BP | GO:0030198 | extracellular matrix organization | IEP | Neighborhood |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
| BP | GO:0034249 | negative regulation of cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0042753 | positive regulation of circadian rhythm | IEP | Neighborhood |
| BP | GO:0043062 | extracellular structure organization | IEP | Neighborhood |
| BP | GO:0045947 | negative regulation of translational initiation | IEP | Neighborhood |
| BP | GO:0051026 | chiasma assembly | IEP | Neighborhood |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0071490 | cellular response to far red light | IEP | Neighborhood |
| BP | GO:0071897 | DNA biosynthetic process | IEP | Neighborhood |
| BP | GO:0090057 | root radial pattern formation | IEP | Neighborhood |
| BP | GO:0090351 | seedling development | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019333 | Int_cplx_su3 | 224 | 439 |
| No external refs found! |