Pp3c10_2600V3.1

Description : regulatory particle triple-A ATPase 6A

Gene families : OG0003868 (Archaeplastida) Phylogenetic Tree(s): OG0003868_tree ,
OG_05_0003884 (LandPlants) Phylogenetic Tree(s): OG_05_0003884_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c10_2600V3.1
Cluster	HCCA: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000792.28	No alias	Protein degradation.26S proteasome.regulatory...	0.04	Archaeplastida
Cre04.g216600	No alias	Protein degradation.26S proteasome.regulatory...	0.03	Archaeplastida
GSVIVT01035767001	No alias	Protein degradation.26S proteasome.regulatory...	0.06	Archaeplastida
Gb_08346	No alias	regulatory component RPT6 of 26S proteasome	0.02	Archaeplastida
LOC_Os02g11050.1	No alias	regulatory component RPT6 of 26S proteasome	0.03	Archaeplastida
Mp1g04290.1	No alias	regulatory component RPT6 of 26S proteasome	0.03	Archaeplastida
Solyc05g018570.3.1	No alias	regulatory component RPT6 of 26S proteasome	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Neighborhood
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Neighborhood
BP	GO:0015931	nucleobase-containing compound transport	IEP	Neighborhood
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
BP	GO:1901264	carbohydrate derivative transport	IEP	Neighborhood
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	235	368
IPR032501	Prot_ATP_ID_OB	122	177

External Links

No external refs found!