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  5. Pp3c10_6710V3.1

Pp3c10_6710V3.1


Description : SNF2 domain-containing protein / helicase domain-containing protein


Gene families : OG0000082 (Archaeplastida) Phylogenetic Tree(s): OG0000082_tree ,
OG_05_0008796 (LandPlants) Phylogenetic Tree(s): OG_05_0008796_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_6710V3.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00058700 evm_27.TU.AmTr_v1... CHD3-type chromatin-remodeling factor PICKLE... 0.02 Archaeplastida
ChrUn.fgenesh.mRNA.85 No alias chromatin remodeling factor (Iswi) 0.02 Archaeplastida
Cpa|evm.model.tig00000545.10 No alias Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01017791001 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
GSVIVT01018979001 No alias ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_16888 No alias ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g05780.1 No alias chromatin remodeling factor (Iswi) 0.03 Archaeplastida
MA_104034g0010 No alias chromatin remodeling factor (DDM1) 0.02 Archaeplastida
MA_23378g0020 No alias Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis... 0.03 Archaeplastida
Mp3g15030.1 No alias chromatin remodeling factor (Iswi) 0.03 Archaeplastida
Mp5g24460.1 No alias chromatin remodeling factor (Chd3/Mi-2) 0.02 Archaeplastida
Smo155996 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
Solyc06g054560.3.1 No alias chromatin remodeling factor (Iswi) 0.02 Archaeplastida
Zm00001e011541_P001 No alias chromatin remodeling factor (DDM1) 0.03 Archaeplastida
Zm00001e017643_P001 No alias chromatin remodeling factor (Iswi) 0.04 Archaeplastida
Zm00001e026331_P001 No alias chromatin remodeling factor (Iswi) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!