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  5. Pp3c10_9730V3.1

Pp3c10_9730V3.1


Description : 26S proteasome regulatory subunit, putative (RPN5)


Gene families : OG0003999 (Archaeplastida) Phylogenetic Tree(s): OG0003999_tree ,
OG_05_0004071 (LandPlants) Phylogenetic Tree(s): OG_05_0004071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_9730V3.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00018620 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.regulatory... 0.03 Archaeplastida
AT5G09900 EMB2107, MSA, RPN5A 26S proteasome regulatory subunit, putative (RPN5) 0.06 Archaeplastida
Cpa|evm.model.tig00021348.57 No alias Protein degradation.26S proteasome.regulatory... 0.07 Archaeplastida
Cre14.g632775 No alias Protein degradation.26S proteasome.regulatory... 0.08 Archaeplastida
GSVIVT01022276001 No alias Protein degradation.26S proteasome.regulatory... 0.02 Archaeplastida
Gb_00178 No alias regulatory component RPN5 of 26S proteasome 0.03 Archaeplastida
Gb_00179 No alias regulatory component RPN5 of 26S proteasome 0.02 Archaeplastida
LOC_Os03g63430.1 No alias regulatory component RPN5 of 26S proteasome 0.05 Archaeplastida
Mp6g06620.1 No alias regulatory component RPN5 of 26S proteasome 0.13 Archaeplastida
Solyc04g051370.4.1 No alias regulatory component RPN5 of 26S proteasome 0.13 Archaeplastida
Zm00001e011647_P002 No alias regulatory component RPN5 of 26S proteasome 0.07 Archaeplastida
Zm00001e016264_P001 No alias regulatory component RPN5 of 26S proteasome 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000717 PCI_dom 300 407
No external refs found!