AT4G14920

Description : Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein

Gene families : OG0000311 (Archaeplastida) Phylogenetic Tree(s): OG0000311_tree ,
OG_05_0000567 (LandPlants) Phylogenetic Tree(s): OG_05_0000567_tree ,
OG_06_0001295 (SeedPlants) Phylogenetic Tree(s): OG_06_0001295_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G14920
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
AT5G36740	No alias	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc...	0.05	Archaeplastida
Cre01.g018200	No alias	RNA biosynthesis.transcriptional activation.PHD finger...	0.02	Archaeplastida
Cre16.g694208	No alias	No description available	0.02	Archaeplastida
GSVIVT01014219001	No alias	RNA biosynthesis.transcriptional activation.PHD finger...	0.03	Archaeplastida
GSVIVT01016041001	No alias	Heat shock cognate protein 80 OS=Solanum lycopersicum	0.02	Archaeplastida
Gb_06644	No alias	component IDM1 of ROS1-recruitment complex. PHD finger...	0.04	Archaeplastida
LOC_Os03g53630.1	No alias	PHD finger transcription factor	0.12	Archaeplastida
MA_14500g0010	No alias	component IDM1 of ROS1-recruitment complex. PHD finger...	0.04	Archaeplastida
Mp6g21090.2	No alias	PHD finger transcription factor	0.03	Archaeplastida
Pp3c1_22210V3.1	No alias	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc...	0.03	Archaeplastida
Pp3c25_4970V3.1	No alias	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc...	0.02	Archaeplastida
Pp3c25_9550V3.1	No alias	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc...	0.02	Archaeplastida
Solyc03g005170.3.1	No alias	PHD finger transcription factor	0.07	Archaeplastida
Zm00001e005667_P001	No alias	PHD finger transcription factor	0.05	Archaeplastida
Zm00001e012046_P003	No alias	PHD finger transcription factor	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint	IEP	Neighborhood
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Neighborhood
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Neighborhood
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Neighborhood
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Neighborhood
BP	GO:0000911	cytokinesis by cell plate formation	IEP	Neighborhood
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Neighborhood
MF	GO:0001085	RNA polymerase II transcription factor binding	IEP	Neighborhood
MF	GO:0001091	RNA polymerase II basal transcription factor binding	IEP	Neighborhood
MF	GO:0001093	TFIIB-class transcription factor binding	IEP	Neighborhood
MF	GO:0001098	basal transcription machinery binding	IEP	Neighborhood
MF	GO:0001099	basal RNA polymerase II transcription machinery binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003724	RNA helicase activity	IEP	Neighborhood
MF	GO:0004004	ATP-dependent RNA helicase activity	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
CC	GO:0005654	nucleoplasm	IEP	Neighborhood
CC	GO:0005829	cytosol	IEP	Neighborhood
CC	GO:0005911	cell-cell junction	IEP	Neighborhood
CC	GO:0005956	protein kinase CK2 complex	IEP	Neighborhood
BP	GO:0006397	mRNA processing	IEP	Neighborhood
BP	GO:0006401	RNA catabolic process	IEP	Neighborhood
BP	GO:0006402	mRNA catabolic process	IEP	Neighborhood
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Neighborhood
BP	GO:0007010	cytoskeleton organization	IEP	Neighborhood
BP	GO:0007017	microtubule-based process	IEP	Neighborhood
BP	GO:0007088	regulation of mitotic nuclear division	IEP	Neighborhood
BP	GO:0007093	mitotic cell cycle checkpoint	IEP	Neighborhood
BP	GO:0007094	mitotic spindle assembly checkpoint	IEP	Neighborhood
MF	GO:0008026	ATP-dependent helicase activity	IEP	Neighborhood
MF	GO:0008134	transcription factor binding	IEP	Neighborhood
MF	GO:0008186	RNA-dependent ATPase activity	IEP	Neighborhood
CC	GO:0009506	plasmodesma	IEP	Neighborhood
BP	GO:0009606	tropism	IEP	Neighborhood
BP	GO:0009629	response to gravity	IEP	Neighborhood
BP	GO:0009630	gravitropism	IEP	Neighborhood
BP	GO:0009870	defense response signaling pathway, resistance gene-dependent	IEP	Neighborhood
BP	GO:0009960	endosperm development	IEP	Neighborhood
BP	GO:0010639	negative regulation of organelle organization	IEP	Neighborhood
BP	GO:0010948	negative regulation of cell cycle process	IEP	Neighborhood
BP	GO:0010965	regulation of mitotic sister chromatid separation	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
MF	GO:0016783	sulfurtransferase activity	IEP	Neighborhood
BP	GO:0022402	cell cycle process	IEP	Neighborhood
CC	GO:0030054	cell junction	IEP	Neighborhood
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEP	Neighborhood
MF	GO:0031071	cysteine desulfurase activity	IEP	Neighborhood
BP	GO:0031577	spindle checkpoint	IEP	Neighborhood
CC	GO:0031981	nuclear lumen	IEP	Neighborhood
BP	GO:0032506	cytokinetic process	IEP	Neighborhood
BP	GO:0033044	regulation of chromosome organization	IEP	Neighborhood
BP	GO:0033045	regulation of sister chromatid segregation	IEP	Neighborhood
BP	GO:0033046	negative regulation of sister chromatid segregation	IEP	Neighborhood
BP	GO:0033047	regulation of mitotic sister chromatid segregation	IEP	Neighborhood
BP	GO:0033048	negative regulation of mitotic sister chromatid segregation	IEP	Neighborhood
MF	GO:0042393	histone binding	IEP	Neighborhood
BP	GO:0042752	regulation of circadian rhythm	IEP	Neighborhood
BP	GO:0042753	positive regulation of circadian rhythm	IEP	Neighborhood
CC	GO:0043076	megasporocyte nucleus	IEP	Neighborhood
CC	GO:0043078	polar nucleus	IEP	Neighborhood
CC	GO:0044428	nuclear part	IEP	Neighborhood
BP	GO:0045839	negative regulation of mitotic nuclear division	IEP	Neighborhood
BP	GO:0045841	negative regulation of mitotic metaphase/anaphase transition	IEP	Neighborhood
BP	GO:0045930	negative regulation of mitotic cell cycle	IEP	Neighborhood
BP	GO:0048278	vesicle docking	IEP	Neighborhood
BP	GO:0051129	negative regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051783	regulation of nuclear division	IEP	Neighborhood
BP	GO:0051784	negative regulation of nuclear division	IEP	Neighborhood
BP	GO:0051983	regulation of chromosome segregation	IEP	Neighborhood
BP	GO:0051985	negative regulation of chromosome segregation	IEP	Neighborhood
MF	GO:0070035	purine NTP-dependent helicase activity	IEP	Neighborhood
MF	GO:0070063	RNA polymerase binding	IEP	Neighborhood
BP	GO:0071173	spindle assembly checkpoint	IEP	Neighborhood
BP	GO:0071174	mitotic spindle checkpoint	IEP	Neighborhood
BP	GO:0080050	regulation of seed development	IEP	Neighborhood
BP	GO:0080113	regulation of seed growth	IEP	Neighborhood
BP	GO:0140029	exocytic process	IEP	Neighborhood
BP	GO:1901988	negative regulation of cell cycle phase transition	IEP	Neighborhood
BP	GO:1901991	negative regulation of mitotic cell cycle phase transition	IEP	Neighborhood
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	Neighborhood
BP	GO:1902100	negative regulation of metaphase/anaphase transition of cell cycle	IEP	Neighborhood
BP	GO:1902410	mitotic cytokinetic process	IEP	Neighborhood
BP	GO:1903047	mitotic cell cycle process	IEP	Neighborhood
BP	GO:1905818	regulation of chromosome separation	IEP	Neighborhood
BP	GO:1905819	negative regulation of chromosome separation	IEP	Neighborhood
BP	GO:2000816	negative regulation of mitotic sister chromatid separation	IEP	Neighborhood
BP	GO:2001251	negative regulation of chromosome organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR019787	Znf_PHD-finger	688	730
IPR032308	Jas	575	647

External Links

No external refs found!

AT4G14920

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation