Description : Small nuclear ribonucleoprotein family protein
Gene families : OG0003406 (Archaeplastida) Phylogenetic Tree(s): OG0003406_tree ,
OG_05_0013554 (LandPlants) Phylogenetic Tree(s): OG_05_0013554_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c11_10290V3.1 | |
Cluster | HCCA: Cluster_99 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre10.g441950 | No alias | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.02 | Archaeplastida | |
GSVIVT01011077001 | No alias | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.04 | Archaeplastida | |
Smo232056 | No alias | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.02 | Archaeplastida | |
Solyc06g084350.3.1 | No alias | component LSm2 of U6-associated LSm accessory... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Neighborhood |
CC | GO:0000786 | nucleosome | IEP | Neighborhood |
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Neighborhood |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Neighborhood |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
BP | GO:0018208 | peptidyl-proline modification | IEP | Neighborhood |
BP | GO:0022900 | electron transport chain | IEP | Neighborhood |
CC | GO:0032993 | protein-DNA complex | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044427 | chromosomal part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
CC | GO:0044815 | DNA packaging complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001163 | LSM_dom_euk/arc | 17 | 79 |
No external refs found! |