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  5. Pp3c11_11230V3.1

Pp3c11_11230V3.1


Description : LOB domain-containing protein 20


Gene families : OG0000938 (Archaeplastida) Phylogenetic Tree(s): OG0000938_tree ,
OG_05_0000559 (LandPlants) Phylogenetic Tree(s): OG_05_0000559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_11230V3.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT2G45410 LBD19 LOB domain-containing protein 19 0.02 Archaeplastida
GSVIVT01027620001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01027621001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
LOC_Os03g14270.1 No alias transcription factor (AS2/LOB) 0.01 Archaeplastida
MA_101817g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_8060019g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_962403g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_97411g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc01g091400.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc01g091420.2.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e001031_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e038582_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e042449_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!