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Description : RNA helicase family protein
Gene families : OG0000373 (Archaeplastida) Phylogenetic Tree(s): OG0000373_tree ,
OG_05_0015928 (LandPlants) Phylogenetic Tree(s): OG_05_0015928_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c11_11920V3.1 | |
| Cluster | HCCA: Cluster_241 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G06670 | NIH | nuclear DEIH-boxhelicase | 0.08 | Archaeplastida | |
| AT1G58060 | No alias | RNA helicase family protein | 0.05 | Archaeplastida | |
| AT2G01130 | No alias | DEA(D/H)-box RNA helicase family protein | 0.05 | Archaeplastida | |
| AT5G04895 | No alias | DEA(D/H)-box RNA helicase family protein | 0.04 | Archaeplastida | |
| Cpa|evm.model.tig00000786.1 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana | 0.01 | Archaeplastida | |
| GSVIVT01011809001 | No alias | DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... | 0.05 | Archaeplastida | |
| GSVIVT01022608001 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| GSVIVT01023271001 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.05 | Archaeplastida | |
| GSVIVT01034780001 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Gb_05411 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.06 | Archaeplastida | |
| Gb_13707 | No alias | DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... | 0.04 | Archaeplastida | |
| Gb_33245 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| Gb_37230 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| Gb_40990 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| LOC_Os01g02884.1 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| LOC_Os01g56190.1 | No alias | DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| LOC_Os03g53760.1 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| LOC_Os04g35260.1 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.05 | Archaeplastida | |
| MA_10429367g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| MA_10432575g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.04 | Archaeplastida | |
| MA_10434659g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| MA_10435499g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_97917g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| Mp5g09990.1 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.07 | Archaeplastida | |
| Pp3c17_19726V3.1 | No alias | RNA helicase family protein | 0.03 | Archaeplastida | |
| Smo177444 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.05 | Archaeplastida | |
| Smo50132 | No alias | DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| Solyc01g006710.4.1 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| Solyc01g006970.4.1 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.07 | Archaeplastida | |
| Solyc01g103690.4.1 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.07 | Archaeplastida | |
| Zm00001e004608_P001 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| Zm00001e017082_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003774 | motor activity | IEP | Neighborhood |
| MF | GO:0003777 | microtubule motor activity | IEP | Neighborhood |
| CC | GO:0005730 | nucleolus | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| MF | GO:0008017 | microtubule binding | IEP | Neighborhood |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
| MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
| MF | GO:0015631 | tubulin binding | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |