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Description : CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits to 5700 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses - 76; Other Eukaryotes - 2900 (source: NCBI BLink).
Gene families : OG0007431 (Archaeplastida) Phylogenetic Tree(s): OG0007431_tree ,
OG_05_0007828 (LandPlants) Phylogenetic Tree(s): OG_05_0007828_tree ,
OG_06_0008318 (SeedPlants) Phylogenetic Tree(s): OG_06_0008318_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G15030 | |
| Cluster | HCCA: Cluster_72 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Pp3c2_10540V3.1 | No alias | No annotation | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000412 | histone peptidyl-prolyl isomerization | IEP | Neighborhood |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Neighborhood |
| MF | GO:0001085 | RNA polymerase II transcription factor binding | IEP | Neighborhood |
| MF | GO:0001091 | RNA polymerase II basal transcription factor binding | IEP | Neighborhood |
| MF | GO:0001093 | TFIIB-class transcription factor binding | IEP | Neighborhood |
| MF | GO:0001098 | basal transcription machinery binding | IEP | Neighborhood |
| MF | GO:0001099 | basal RNA polymerase II transcription machinery binding | IEP | Neighborhood |
| MF | GO:0005527 | macrolide binding | IEP | Neighborhood |
| MF | GO:0005528 | FK506 binding | IEP | Neighborhood |
| CC | GO:0005730 | nucleolus | IEP | Neighborhood |
| BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
| MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
| BP | GO:0009870 | defense response signaling pathway, resistance gene-dependent | IEP | Neighborhood |
| BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
| MF | GO:0042393 | histone binding | IEP | Neighborhood |
| BP | GO:0055062 | phosphate ion homeostasis | IEP | Neighborhood |
| BP | GO:0055081 | anion homeostasis | IEP | Neighborhood |
| BP | GO:0055083 | monovalent inorganic anion homeostasis | IEP | Neighborhood |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
| MF | GO:0070063 | RNA polymerase binding | IEP | Neighborhood |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
| BP | GO:0072505 | divalent inorganic anion homeostasis | IEP | Neighborhood |
| BP | GO:0072506 | trivalent inorganic anion homeostasis | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019129 | Folate-sensitive_fs_Fra10Ac1 | 59 | 175 |
| No external refs found! |