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AT4G15093


Description : catalytic LigB subunit of aromatic ring-opening dioxygenase family


Gene families : OG0003484 (Archaeplastida) Phylogenetic Tree(s): OG0003484_tree ,
OG_05_0005055 (LandPlants) Phylogenetic Tree(s): OG_05_0005055_tree ,
OG_06_0004902 (SeedPlants) Phylogenetic Tree(s): OG_06_0004902_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G15093
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00162860 evm_27.TU.AmTr_v1... 4,5-DOPA dioxygenase extradiol OS=Beta vulgaris 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006725 cellular aromatic compound metabolic process ISS Interproscan
MF GO:0016491 oxidoreductase activity ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005451 monovalent cation:proton antiporter activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006814 sodium ion transport IEP Neighborhood
BP GO:0010351 lithium ion transport IEP Neighborhood
MF GO:0015081 sodium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015385 sodium:proton antiporter activity IEP Neighborhood
MF GO:0015491 cation:cation antiporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0099516 ion antiporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004183 Xdiol_dOase_suB 7 265
No external refs found!