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  5. Pp3c11_17570V3.1

Pp3c11_17570V3.1


Description : THO2


Gene families : OG0003473 (Archaeplastida) Phylogenetic Tree(s): OG0003473_tree ,
OG_05_0005015 (LandPlants) Phylogenetic Tree(s): OG_05_0005015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_17570V3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00044110 evm_27.TU.AmTr_v1... RNA processing.messenger ribonucleoprotein particle... 0.08 Archaeplastida
AT1G24706 THO2, AtTHO2 THO2 0.16 Archaeplastida
Cpa|evm.model.tig00001428.15 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 Archaeplastida
Cpa|evm.model.tig00001636.2 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
Cre12.g507700 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
GSVIVT01011619001 No alias RNA processing.messenger ribonucleoprotein particle... 0.16 Archaeplastida
Gb_33812 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.08 Archaeplastida
LOC_Os01g68810.1 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.08 Archaeplastida
MA_10184563g0010 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.02 Archaeplastida
MA_10430572g0010 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.07 Archaeplastida
MA_10431208g0010 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.04 Archaeplastida
MA_9541851g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9974463g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g20320.1 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.15 Archaeplastida
Smo173562 No alias RNA processing.messenger ribonucleoprotein particle... 0.12 Archaeplastida
Solyc05g017890.4.1 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.11 Archaeplastida
Zm00001e020164_P001 No alias No annotation 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!