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  5. Pp3c11_18680V3.1

Pp3c11_18680V3.1


Description : VPS54


Gene families : OG0002922 (Archaeplastida) Phylogenetic Tree(s): OG0002922_tree ,
OG_05_0005032 (LandPlants) Phylogenetic Tree(s): OG_05_0005032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_18680V3.1
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00168660 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.GARP/EARP... 0.06 Archaeplastida
Cpa|evm.model.tig00000241.25 No alias No description available 0.01 Archaeplastida
Cre02.g087551 No alias Vesicle trafficking.target membrane tethering.GARP/EARP... 0.03 Archaeplastida
GSVIVT01037972001 No alias Vesicle trafficking.target membrane tethering.GARP/EARP... 0.04 Archaeplastida
Gb_03763 No alias GARP-specific component VPS54 of GARP/EARP... 0.04 Archaeplastida
LOC_Os04g13470.1 No alias GARP-specific component VPS54 of GARP/EARP... 0.06 Archaeplastida
MA_418299g0010 No alias GARP-specific component VPS54 of GARP/EARP... 0.02 Archaeplastida
MA_51003g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp5g09490.1 No alias GARP-specific component VPS54 of GARP/EARP... 0.05 Archaeplastida
Zm00001e008702_P001 No alias GARP-specific component VPS54 of GARP/EARP... 0.06 Archaeplastida
Zm00001e040599_P001 No alias GARP-specific component VPS54 of GARP/EARP... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005548 phospholipid transporter activity IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015748 organophosphate ester transport IEP Neighborhood
BP GO:0015914 phospholipid transport IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
MF GO:0048365 Rac GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!