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  5. Pp3c11_19620V3.1

Pp3c11_19620V3.1


Description : cold, circadian rhythm, and RNA binding 1


Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0000481 (LandPlants) Phylogenetic Tree(s): OG_05_0000481_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_19620V3.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00132070 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00043p00170970 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
AT4G39260 CCR1, GR-RBP8,... cold, circadian rhythm, and RNA binding 1 0.06 Archaeplastida
GSVIVT01016195001 No alias Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01033897001 No alias Small RNA-binding protein 11, chloroplastic... 0.01 Archaeplastida
Gb_39218 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp2g24130.1 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!