AT4G15417 (ATRTL1, RTL1)

Aliases : ATRTL1, RTL1

Description : RNAse II-like 1

Gene families : OG0000221 (Archaeplastida) Phylogenetic Tree(s): OG0000221_tree ,
OG_05_0001704 (LandPlants) Phylogenetic Tree(s): OG_05_0001704_tree ,
OG_06_0001136 (SeedPlants) Phylogenetic Tree(s): OG_06_0001136_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AT4G15417

Target Alias Description ECC score Gene Family Method Actions
AT5G45150 RTL3 RNAse THREE-like protein 3 0.04 Archaeplastida
GSVIVT01030481001 No alias Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
LOC_Os03g38740.1 No alias Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp.... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
MF GO:0004525 ribonuclease III activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006396 RNA processing ISS Interproscan
Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0080117 secondary growth IEP Neighborhood
BP GO:0080190 lateral growth IEP Neighborhood
InterPro domains Description Start Stop
IPR000999 RNase_III_dom 65 170
No external refs found!