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  5. Pp3c11_23240V3.1

Pp3c11_23240V3.1


Description : DNA binding


Gene families : OG0001389 (Archaeplastida) Phylogenetic Tree(s): OG0001389_tree ,
OG_05_0003096 (LandPlants) Phylogenetic Tree(s): OG_05_0003096_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_23240V3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT3G05380 ATALY2, ALY2 DIRP ;Myb-like DNA-binding domain 0.03 Archaeplastida
AT3G21430 ATALY3, ALY3 No description available 0.04 Archaeplastida
Cpa|evm.model.tig00020562.27 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Cre13.g570150 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01000089001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01017770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
LOC_Os01g09760.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os03g43800.1 No alias transcription factor (MYB-related) 0.06 Archaeplastida
MA_92248g0010 No alias No annotation 0.04 Archaeplastida
Mp8g06450.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Smo420594 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
Solyc01g067560.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc12g098160.2.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e016566_P004 No alias transcription factor (MYB-related) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044599 AP-5 adaptor complex IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!