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  5. Pp3c11_24040V3.1

Pp3c11_24040V3.1


Description : 5\-3\ exonuclease family protein


Gene families : OG0006764 (Archaeplastida) Phylogenetic Tree(s): OG0006764_tree ,
OG_05_0008519 (LandPlants) Phylogenetic Tree(s): OG_05_0008519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_24040V3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00019230 evm_27.TU.AmTr_v1... DNA repair protein UVH3 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT3G28030 UVR1, UVH3 5'-3' exonuclease family protein 0.11 Archaeplastida
Cpa|evm.model.tig00020544.9 No alias DNA repair protein UVH3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre10.g429050 No alias DNA repair protein UVH3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032508001 No alias DNA repair protein UVH3 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_23486 No alias DNA repair endonuclease (XPG) 0.01 Archaeplastida
LOC_Os03g10780.1 No alias DNA repair endonuclease (XPG) 0.08 Archaeplastida
Mp2g18320.1 No alias DNA repair endonuclease (XPG) 0.09 Archaeplastida
Solyc02g067670.4.1 No alias DNA repair endonuclease (XPG) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!