Pp3c11_25350V3.1

Description : Ribosomal protein S5/Elongation factor G/III/V family protein

Gene families : OG0001511 (Archaeplastida) Phylogenetic Tree(s): OG0001511_tree ,
OG_05_0001368 (LandPlants) Phylogenetic Tree(s): OG_05_0001368_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c11_25350V3.1
Cluster	HCCA: Cluster_95

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00133570	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation elongation.eEF2...	0.04	Archaeplastida
AT1G56070	LOS1	Ribosomal protein S5/Elongation factor G/III/V family protein	0.03	Archaeplastida
Cpa\|evm.model.tig00021464.39	No alias	Protein biosynthesis.translation elongation.eEF2...	0.02	Archaeplastida
Cre12.g516200	No alias	Protein biosynthesis.translation elongation.eEF2...	0.05	Archaeplastida
LOC_Os02g32030.1	No alias	mRNA-translocation factor (eEF2)	0.03	Archaeplastida
MA_10366801g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_10426758g0010	No alias	transcription factor (TUB)	0.02	Archaeplastida
MA_10426758g0020	No alias	Elongation factor 2 OS=Beta vulgaris...	0.02	Archaeplastida
Mp2g20190.1	No alias	mRNA-translocation factor (eEF2)	0.04	Archaeplastida
Mp2g20200.1	No alias	mRNA-translocation factor (eEF2)	0.04	Archaeplastida
Pp3c11_25450V3.1	No alias	Ribosomal protein S5/Elongation factor G/III/V family protein	0.03	Archaeplastida
Pp3c7_1950V3.1	No alias	Ribosomal protein S5/Elongation factor G/III/V family protein	0.04	Archaeplastida
Pp3s128_10V3.1	No alias	Ribosomal protein S5/Elongation factor G/III/V family protein	0.04	Archaeplastida
Pp3s128_50V3.1	No alias	Ribosomal protein S5/Elongation factor G/III/V family protein	0.08	Archaeplastida
Solyc08g062920.3.1	No alias	mRNA-translocation factor (eEF2)	0.04	Archaeplastida
Zm00001e006293_P001	No alias	mRNA-translocation factor (eEF2)	0.02	Archaeplastida
Zm00001e006294_P001	No alias	mRNA-translocation factor (eEF2)	0.02	Archaeplastida
Zm00001e029078_P002	No alias	mRNA-translocation factor (eEF2)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0006486	protein glycosylation	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Neighborhood
MF	GO:0031369	translation initiation factor binding	IEP	Neighborhood
BP	GO:0042254	ribosome biogenesis	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043413	macromolecule glycosylation	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0070085	glycosylation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000795	TF_GTP-bd_dom	17	342
IPR000640	EFG_V-like	724	811
IPR004161	EFTu-like_2	394	467
IPR005517	Transl_elong_EFG/EF2_IV	611	722

External Links

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Pp3c11_25350V3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation